LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu05g00128	ATGCCAACAATGCCATATATGGATATCATAAGTTatgttcttattttcttaatgatATTTATTGTTACACAAGTTTTTTATTCACTAATTTCAGCCATAAcaagaaacataacaaaatcCAAGCTCCCACCAGGACCATTCCCTCTTCCCATAGTTGGAAACCTCTTTGTAATGAACAACAAACCACATAAAGCCTTAGCCAAACTTGCCAAAATTTATGGTCCTATACTTAGTTTAAAGTTAGGTCAAGTGACAACCATAGTTGTCTCTTCGGCCGACATGGCCAAAGAGATACTCCAAACTCATGATTCGTTACTTGCAGACAGAACCGTACCACATGCTTTAACCGCTTTCAACCATGACCAATTTGGCGTGGGATTCCTCCCTCTTTCGCCTCTTTGGCGAGAGATGAGAAGGGTATGCAAAAATCAACTATTCTCTAACAAGAGTCTTGATGCTAATCAATATCTTAGACGTAATAAGATAGATGAACTCATCAATTATGTTTCTCAATGTAGCCTAAAGGGTGAAGCAATAGACATTGGAAGTGTAGCTTTTAAGACTTCAATTAATTTGTTGTCAAATACTATTTTTTCTGTAGACTTTGCTAATATCTCTGCAGGTACtaataacaataaagaaaacaaagatttAGTTATTAATATGGCGAAGACCGTTGGAGTGCCAAACATGTCTGATTTTTTCCCATTGTTGAGGTTGATTGATCCACAAGGCATAAAAAAGACTTATCTATTTTATATTGGAAAGTTGTTCAGTGTCTTCGACAACATTATCGACCAAAGATTGAAGTTGCGAAATGGGGATGATTTTGTCACCAACAATGACATGCTTGACTCGTTGCTCAATCTTGTTGAAGAAAACCAAAAGGAGATGGACAGAGAAAAAATGGAACATTTACTACATGATCTAATTGTTGGAGGAACTGATACAACTACATATACATTAGAATGGGCAATGACCGAGCTACTTCACAATCCAAATATAATGTCAAAGGCCAAAAAGGAACTTGAAGAAATCATTGGATTAGGAAACTCAATTGAGGAATCGGACATTGCTAGACTCCCTTACTTACAAGCAATAATAAAAGAGACTTTGCGTTTGCACCCAATAGCTCCACTTTTGCTTCCTCGAAAAGCAAAGACCGATGTTAAACTCAATGGCTACATGATTCCAAAAGGTGCGCAAATCTTCGTTAATGTGTGGGCTATTGGTAGAGACCCAGAAATATGGGACGATCCAAATTTATTTTCGCCAGAGAGATATTTGGGAACAAAACTTGATATCAAGGGTCAAAATTTTCAGCTCACACCGTTTGGTAGTGGGAGGCGAATATGTCCCGGTTTGCCGTTGGCTATGAGGATGTTGCACATGATGTTGGGATCATTACTAATTTCTTTTGATTGGAAGCTAGAAAATGGTATGAAACCTGAAGAAATTGACATGGAAGGGGCAATAGATGGACTTGCCTTGAAAAAATGTGAATCCTTGAGAGTTATTCCAACCAAAATcagtaattaa	1539	0.3626	MPTMPYMDIISYVLIFLMIFIVTQVFYSLISAITRNITKSKLPPGPFPLPIVGNLFVMNNKPHKALAKLAKIYGPILSLKLGQVTTIVVSSADMAKEILQTHDSLLADRTVPHALTAFNHDQFGVGFLPLSPLWREMRRVCKNQLFSNKSLDANQYLRRNKIDELINYVSQCSLKGEAIDIGSVAFKTSINLLSNTIFSVDFANISAGTNNNKENKDLVINMAKTVGVPNMSDFFPLLRLIDPQGIKKTYLFYIGKLFSVFDNIIDQRLKLRNGDDFVTNNDMLDSLLNLVEENQKEMDREKMEHLLHDLIVGGTDTTTYTLEWAMTELLHNPNIMSKAKKELEEIIGLGNSIEESDIARLPYLQAIIKETLRLHPIAPLLLPRKAKTDVKLNGYMIPKGAQIFVNVWAIGRDPEIWDDPNLFSPERYLGTKLDIKGQNFQLTPFGSGRRICPGLPLAMRMLHMMLGSLLISFDWKLENGMKPEEIDMEGAIDGLALKKCESLRVIPTKISN	512

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tsu05g00128	512	Gene3D	Cytochrome P450	34	505	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu05g00128	512	PRINTS	E-class P450 group I signature	322	348	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu05g00128	512	PRINTS	E-class P450 group I signature	406	430	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu05g00128	512	PRINTS	E-class P450 group I signature	365	383	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu05g00128	512	PRINTS	E-class P450 group I signature	70	89	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu05g00128	512	PRINTS	E-class P450 group I signature	302	319	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu05g00128	512	PRINTS	E-class P450 group I signature	442	452	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu05g00128	512	PRINTS	E-class P450 group I signature	452	475	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu05g00128	512	SUPERFAMILY	Cytochrome P450	43	505	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tsu05g00128	512	PANTHER	CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED	7	511	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu05g00128	Tsu-Chr5	919469	921396	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu05g00128	7	509	Cytochrome P450	AT2G45550	44.031	6.31e-161	465

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu05g00128	-		-	gmx:100792017	581.637

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu05g00128	05	919469	921396	Tsu05g00128	05	919469	921396	ECH

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