Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00127 ATGGCAACAATATCATTTATGGATATACTCAGTTATGTACTTATCTTCTTGTTGTTATTCATTGTTACACAAGTTTTTTATTCACTAATTTCAGCCataacaagaaacaaaacaaaattcaagcTTCCACCAGGACCTTTCCCTCTTCCCATAGTTGGAAATCTCTTTGTAATGGATAACAAACCACATAAATCCTTAGCCAAACTTGCCAAAATTTATGGTCCAATACTTAGTTTAAAGCTAGGACAAGTAACAACCATAGTTATCTCTTCGGCCGACATGGCCAAAGAGGTACTTCAAACTCATGATTCGTCACTTTCAGACCGATCTGTACCACATGCTTTAACCGCTTTCAACCACGACCAATTTGGTGTGGGATTCCTCCCTCTTTCGCCTCTTTGGCGAGAGATGAGAAGGGTATGCAAAAATCAACTATTCTCTAACAAAAGTCTTGATGCGAATCAATATCTTAGGCGTAATAAGATAGATGAACTCGTCAATTATGTTTCTCAATGTAGTCTAAAGGGTGATGCAATAGACATCGGAAGTTTGGCTTTTAAGACTTCAATTAATTTGTTGTCAAATACTATTTTGTCCGTAGACTTTGCTACTATCTCTGCAGGTATTAATgataataaagaaaacaaagatttGGTTATGAATATGGCAAAGACGGTTGGAGTGCCAAACATGTCTGATTTTTTTCCATTGTTGAGGTTGATTGATCCACAAGGCATAAAAAAGACCTATGTGTTTTATATTGAAAAGTTGTTCGGTGTTTTCAACAACATAATCGACCAAAGGTTGAAGTTGCGAGAAGGGGACGGTTTCATCGCCAAAAACGACATGTTAGACTCCTTGCTCGATCTTTTTGAAGAAAACCAGAAGGAGATGGACAGAGAAAAAATGGAACATTTACTACACGATCTAATTGTTGGAGGTACTGATACAACTACATATACATTAGAATGGGCATTGACCGAACTACTTCGCAATCCAAATATAATGTCAAAGGCCAAAAGGGAACTTGAAGAAATAATTGGACTCGGAAACACAATTGAGGAATCAGACATTGCTAGACTCCCATACTTACAAGCAATAATAAAAGAGACTTTGCGTTTGCACCCAATAGCTCCACTTTTGCTCCCTCGTAAAGCAAAGACCGATGTAGAAGTCAATGGCTACATGATTCCAAAAGGTGCACAAATTTTCGTTAATGTGTGGGCTATTGGTAGAGATCCAAACGCATGGGAAtgttcaaatttattttcaccAGAGAGATATTTAGGAACAAAGCTTGATATCAAGGGTCAAAACTTTCAGCTCACGCCGTTTGGAAGTGGGAGGCGAATATGTCCCGGTTTGCCGTTGGCTATGAGGATGTTGCACATGATGTTGGGATCATTACTAATTTCTTTTGATTGGAAGCTAGAAAATGACATGAAACCTGAAGAAATTGACATGGAGGATGCAATAGAAGGACTTGCCTTGAGAAAATGTGAATCCTTGAGAGCTATTCCAACCAAAATAATTAAGTAA 1539 0.3671 MATISFMDILSYVLIFLLLFIVTQVFYSLISAITRNKTKFKLPPGPFPLPIVGNLFVMDNKPHKSLAKLAKIYGPILSLKLGQVTTIVISSADMAKEVLQTHDSSLSDRSVPHALTAFNHDQFGVGFLPLSPLWREMRRVCKNQLFSNKSLDANQYLRRNKIDELVNYVSQCSLKGDAIDIGSLAFKTSINLLSNTILSVDFATISAGINDNKENKDLVMNMAKTVGVPNMSDFFPLLRLIDPQGIKKTYVFYIEKLFGVFNNIIDQRLKLREGDGFIAKNDMLDSLLDLFEENQKEMDREKMEHLLHDLIVGGTDTTTYTLEWALTELLRNPNIMSKAKRELEEIIGLGNTIEESDIARLPYLQAIIKETLRLHPIAPLLLPRKAKTDVEVNGYMIPKGAQIFVNVWAIGRDPNAWECSNLFSPERYLGTKLDIKGQNFQLTPFGSGRRICPGLPLAMRMLHMMLGSLLISFDWKLENDMKPEEIDMEDAIEGLALRKCESLRAIPTKIIK 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00127 512 Gene3D Cytochrome P450 32 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 Pfam Cytochrome P450 43 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 510 - -
Tsu05g00127 512 SUPERFAMILY Cytochrome P450 43 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00127 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Tsu05g00127 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 510 - -
Tsu05g00127 512 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00127 Tsu-Chr5 911851 913688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00127 7 509 Cytochrome P450 AT2G45550 43.836 6.02e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00127 - - gmx:100792017 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01679 04 17734203 17739980 Tsu05g00127 05 911851 913688 ECH
Tsu05g00127 05 911851 913688 Tsu05g00127 05 911851 913688 ECH