Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00120 ATGGTGAATGGAGGAGGTGCAGTTGGTGTGAGAAATCTGAATGAAGAAGAAATCAAGTGGCCACCATGGTTGAAACCACTTCTCCAAACAAGTTTCTTTGTTCAATGCAAAGTGCATGCAGATTCCAACAAAAGTGAATGCAATATGTATTGCTTAGATTGTATGAATGGAGCCCTTTGCTCTGCATGTTTGGCTTCTCATAAAGGACATAATGCTATTCAGATAAGAAGGTCTTCATATCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTTTGGACATAACGGGGGTTCAAACATATGTTATAAACAGTGCAAAGATTGTGTTCTTGAATGAAAGACCTCAGCCTAGGGTTGGCAAAGGAGTCACCAATACTTGCCATGTATGTGAACGAAGCCTTCTTGATTCCTTCTCCTACTGCTCCCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAATtccagaagaagaaaaactcaAGTGAGAGAGATGGATCAGATGGTGAAGAATCAAGCAGTAATGAAAGTGAcagaaacataaacaaaatcCAAAGCTTCACACCATCAACACCACCACCTTACAAAACAGCTAAGAGGAGGAAGGGGATTCCACATAGAGCTCCAATGGGAGGAAACCTTATTATAGAATACTTATACTAA 660 0.3803 MVNGGGAVGVRNLNEEEIKWPPWLKPLLQTSFFVQCKVHADSNKSECNMYCLDCMNGALCSACLASHKGHNAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKIVFLNERPQPRVGKGVTNTCHVCERSLLDSFSYCSLGCKIVGTSKKFQKKKNSSERDGSDGEESSSNESDRNINKIQSFTPSTPPPYKTAKRRKGIPHRAPMGGNLIIEYLY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00120 219 MobiDBLite consensus disorder prediction 156 176 - -
Tsu05g00120 219 Pfam PLATZ transcription factor 76 147 IPR006734 -
Tsu05g00120 219 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 212 - -
Tsu05g00120 219 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 212 - -
Tsu05g00120 219 MobiDBLite consensus disorder prediction 156 206 - -
Tsu05g00120 219 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00120 Tsu-Chr5 842194 844444 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tsu05g00120 PLATZ 8.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00120 - - gmx:100792668 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00120 05 842194 844444 Tsu05g00120 05 842194 844444 ECH