Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00085 ATGGAGGAAACTTTTATTTCTTCCAAATCACGTGCCAAAGAAGAGAGAATTGATTTAACCGAAATCACACTCCGAACCCTTCATCTTTCGGACCTCAATGATCTCATGGTATGGACAACTGATGAAAAAGTGGCCAAGTTCTGCTCTTGGGAACCTTACACCAGCAAAGACGACGGCATCAAATTCATCGAAAATATACCGAAAAAGTTTCTATGGTGCAAAGCAATATGCCTTAACGATCGTGCTATTGGTTGTATTTCGCTGTACTCAAGAGAACCTGATGATAAATGCAGAAACAAATCTGCAGAACTTGGTTATGTTCTTGGTTCTAAATACTGGGGTAAAGGAATTGTGACATATGTTGTGAAACAAGTGGTTAAGGTTGCATTCAGTGAATTGAAAAACTTGGAAAGGCTTGAAGCTTTTGTTGATGTTGAAAATGTTGGGTCTCAAAGAGTGTTGGAGAAAGCTGGTTTCCAAAAAGAAGGAGTTCTTAGGAAGTATCTGTTCTTGAAAGGAAAAAGTAGAGATATGATCATTTCAAGTGTTATTTTTACTGATCTCAAAGTATGA 573 0.377 MEETFISSKSRAKEERIDLTEITLRTLHLSDLNDLMVWTTDEKVAKFCSWEPYTSKDDGIKFIENIPKKFLWCKAICLNDRAIGCISLYSREPDDKCRNKSAELGYVLGSKYWGKGIVTYVVKQVVKVAFSELKNLERLEAFVDVENVGSQRVLEKAGFQKEGVLRKYLFLKGKSRDMIISSVIFTDLKV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00085 190 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 13 188 - -
Tsu05g00085 190 Gene3D - 8 185 - -
Tsu05g00085 190 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 183 IPR016181 -
Tsu05g00085 190 Pfam Acetyltransferase (GNAT) domain 22 160 IPR000182 GO:0016407
Tsu05g00085 190 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 22 177 IPR000182 GO:0016407
Tsu05g00085 190 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 13 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00085 Tsu-Chr5 606420 606992 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu05g00085 Acetyltransf_3 1.4e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00085 - - mtr:MTR_5g006520 297.745