Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00084 ATGATGGAGGAAACATTTATTTCTTCCAAACCATGTCCCAAAGAAGAGAGCATTGATTTAACCAAAATCACACTCCGACCCTTTCATCTTTCAGACATCGATGATATCATGGTGTGGTCAACCGATGAAAAAGTTGCCAAGTTCTGCTCTTGGGAACCTTACACCAGCAAAGATGATGCAATCAACTTCATTGAAAGTATAGAAACCAAGTTTCTACGTTGCAAAGCGATATGCTATAATGATCGCGCTATTGGGTGCATGCTTCTGTTTGCATGTTCACTTGATGATAAAAGCAGAAACAAATCTGCAGAAATTGGATATAATCTAGGCTCTAAATACTGGGGTAAAGGGATTGCAACATGTGCTGTGAAACAAATTGTTAAGGATGCATTCAGTGAAATGCCACACTTGGAAAGGCTTGAAGCTCTGGTTGATGTGGAAAATGTTGGGTCTCAAAGGGTGCTTGAGAAAGCTGGTTTCCATAAAGAGGGAGTTCTAAGGAAGTATTTGTTCATGAAAGGAAAAAGCAGAGATATGATCATGTTCAGTATTCTATCTACTGATCTACAGCTATGa 576 0.3924 MMEETFISSKPCPKEESIDLTKITLRPFHLSDIDDIMVWSTDEKVAKFCSWEPYTSKDDAINFIESIETKFLRCKAICYNDRAIGCMLLFACSLDDKSRNKSAEIGYNLGSKYWGKGIATCAVKQIVKDAFSEMPHLERLEALVDVENVGSQRVLEKAGFHKEGVLRKYLFMKGKSRDMIMFSILSTDLQL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00084 191 Pfam Acetyltransferase (GNAT) domain 23 161 IPR000182 GO:0016407
Tsu05g00084 191 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 14 189 - -
Tsu05g00084 191 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 185 IPR016181 -
Tsu05g00084 191 Gene3D - 15 191 - -
Tsu05g00084 191 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 14 189 - -
Tsu05g00084 191 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 178 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00084 Tsu-Chr5 599669 600479 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu05g00084 Acetyltransf_3 1e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00084 - - mtr:MTR_5g006520 288.115