Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00069 ATGGAAGAGGGAAAGCGAGGAACGATTCTGATAACAAACGACGATGGAATTGACGCTCCTGGTTTAAGAGCTTTGGTTGACTCTTTAGTCAACTCCAATCTTTTCAATATCTTTGTCTCTGCTCCCGATAGTGAGAAATCAGCTGTTAGTCACAGCATCACATGGCTTCATCCTGTAGCTGTTAAACAAGTCCATATTCATGGAACCGTCGCTTCATTCGCCGTTTCTGGTTCGTTACTCTCTTTCCTGTTTTTCACACGCTCAATTTCAATTCTCAAccgctttttgttttttgcaggGACTCCGGCTGATTGCACTTCTCTCGGAATTTCCAAAGCACTCTTTCCTATAATACCTGATTTGGTAGTCAGTGGCATAAATAAGGGTAGCAACTGCGGCTATCATATTGTTTACTCAGGAACTGTAGCTGGTGCTCGAGAGGCCTTCTTCAATGATATCCCTTCTATCTCCATTTCATATGATTGGGTTGAAGGAAAGAGTAATCCACATGACTTTTCCCTTGCTGCACAAGTTTGCATTCCAATCATAAATGCTGTACTGGTTGAGATAAAGAACCAAAGCTACCCTGGACGATGTTTTTTGAATATAGATGTGCCAAACAGTGTTGCTAACCACAAGGGTTACAAGCTAACGAGGCAGGGTAAAAGTATCTTTAAGATGGGATGGAGGCAAGTCACCTCTGATACTGAAGGACGTATAATGTCATCTGATATGACCAATACAGATACACCTACAAATTCCGGCACATCATCTACATCCCCTGAACATCTTTTATTTGCGAGAGAGGCAAGAGGCTCCCTAcctgattatgatgatgatacAGATCACAAATCTTTGAAAGCAGGCTATaTTACTGTTACTGCTCTTGCTGCTCTCACTCATGCGGATCTTTATAATGCTAACCTAGGCAGTCTGGTTGCTCGAAAGTGCATTTATGACAAAATTACTGATGAAGATTTGGAATGCTGTCCAGTTTGCAACATTGATTTGGGCTGTGTTCCACTTGAGAAACTAAGGCTGGACCACAGTAAGCTAAACCTAAGGTACATACTTTTCCCTTCAAAGCGAAGAGAGGTGAAAGAACCTGAAGTTGTCGCCGCCTCAGTACCATTGTCAgctaaaagaaaagagaaatgtCTATCATCCTTGGTGTTCAACACACCAAGAGTATCTCCACAATCAACCATGACAGGAAGAACAAAACCTACAAGAAAAGCTAGCAGTCTGCGGCCCTCTAGTCCCGAGAGTTCAAGCTCGCCTGAAACTTCAAATAAGTTGCGTCAAAATAATGAACAACCTCAATCCTCTCAACCAGAAATTGATTTAGCTAAGCTCACTAGGGTCCTCAATGTCCCTGAACAAGAAAAAGCCAATACCTCTGTTGATGATCAGAATCAACAAGTTAATATTTCTAAAACCTCTATCTTATCATCTTCTGAAACCTTACTTGAACTACATTTTGACACCAACCTAGTCAATGAAACCTCTGTTGATAATCAACAAGTTGAGACACAGCCGGGAATCATCCCAGACATATCTCAAAATAAACCTCAACCACCAaaatcacctcaacataccatcacaccctcaaactctgaacctcaaccaattaactcaaatgaccctgatgtcttgagtgaatgcaacagcctattcaggcagatacatggtcttcatgagctgaggcaatctgatatgcctTCAGCTGAGTATGCTGCTAAATGGGTGAGCCTAACTGAAGAATTGGTGAAGGagctgtatagacttcaagaggctgatgttaaggagcagaagagttttgacaaaaatagtgctactgaagttgaagaggtcattcagattcagaaggacacagagaggaatcaacctgaatcctcttctgtaagagcaagtgatgagcaaaacctgatggagaagttagcatcacttgcggaagatctgaatgagcctattttggacaatttgggagcaaatcaagagcatttgagaaatccagtgtatgaggctgagattgaaagTATTAAAGCCGAGATGGCTAACTTGGATGACACCTCTCTTGAGGAATCTgattcatctggatcagatctctcttcctcaggagaagactctagtCCATCTGAGACTTGA 2148 0.3198 MEEGKRGTILITNDDGIDAPGLRALVDSLVNSNLFNIFVSAPDSEKSAVSHSITWLHPVAVKQVHIHGTVASFAVSGSLLSFLFFTRSISILNRFLFFAGTPADCTSLGISKALFPIIPDLVVSGINKGSNCGYHIVYSGTVAGAREAFFNDIPSISISYDWVEGKSNPHDFSLAAQVCIPIINAVLVEIKNQSYPGRCFLNIDVPNSVANHKGYKLTRQGKSIFKMGWRQVTSDTEGRIMSSDMTNTDTPTNSGTSSTSPEHLLFAREARGSLPDYDDDTDHKSLKAGYITVTALAALTHADLYNANLGSLVARKCIYDKITDEDLECCPVCNIDLGCVPLEKLRLDHSKLNLRYILFPSKRREVKEPEVVAASVPLSAKRKEKCLSSLVFNTPRVSPQSTMTGRTKPTRKASSLRPSSPESSSSPETSNKLRQNNEQPQSSQPEIDLAKLTRVLNVPEQEKANTSVDDQNQQVNISKTSILSSSETLLELHFDTNLVNETSVDNQQVETQPGIIPDISQNKPQPPKSPQHTITPSNSEPQPINSNDPDVLSECNSLFRQIHGLHELRQSDMPSAEYAAKWVSLTEELVKELYRLQEADVKEQKSFDKNSATEVEEVIQIQKDTERNQPESSSVRASDEQNLMEKLASLAEDLNEPILDNLGANQEHLRNPVYEAEIESIKAEMANLDDTSLEESDSSGSDLSSSGEDSSPSET 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00069 715 MobiDBLite consensus disorder prediction 515 551 - -
Tsu05g00069 715 MobiDBLite consensus disorder prediction 625 640 - -
Tsu05g00069 715 PANTHER 5'-NUCLEOTIDASE SURE 4 78 IPR030048 GO:0008252
Tsu05g00069 715 PANTHER 5'-NUCLEOTIDASE SURE 99 304 IPR030048 GO:0008252
Tsu05g00069 715 PANTHER OS07G0204500 PROTEIN 99 304 - -
Tsu05g00069 715 SUPERFAMILY SurE-like 8 304 IPR036523 GO:0016787
Tsu05g00069 715 MobiDBLite consensus disorder prediction 396 448 - -
Tsu05g00069 715 MobiDBLite consensus disorder prediction 525 551 - -
Tsu05g00069 715 Hamap 5'/3'-nucleotidase SurE [surE]. 7 322 IPR030048 GO:0008252
Tsu05g00069 715 MobiDBLite consensus disorder prediction 240 262 - -
Tsu05g00069 715 PANTHER OS07G0204500 PROTEIN 4 78 - -
Tsu05g00069 715 TIGRFAM surE: 5'/3'-nucleotidase SurE 8 237 IPR002828 GO:0016787
Tsu05g00069 715 Pfam Survival protein SurE 9 224 IPR002828 GO:0016787
Tsu05g00069 715 MobiDBLite consensus disorder prediction 692 715 - -
Tsu05g00069 715 MobiDBLite consensus disorder prediction 622 641 - -
Tsu05g00069 715 MobiDBLite consensus disorder prediction 685 715 - -
Tsu05g00069 715 Gene3D - 8 322 IPR036523 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00069 Tsu-Chr5 532878 543071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00069 314 450 C3H Transcription Factor Family AT2G30580 45.455 4.45e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00069 K03787 - gmx:100808698 422.935