Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu05g00069 | ATGGAAGAGGGAAAGCGAGGAACGATTCTGATAACAAACGACGATGGAATTGACGCTCCTGGTTTAAGAGCTTTGGTTGACTCTTTAGTCAACTCCAATCTTTTCAATATCTTTGTCTCTGCTCCCGATAGTGAGAAATCAGCTGTTAGTCACAGCATCACATGGCTTCATCCTGTAGCTGTTAAACAAGTCCATATTCATGGAACCGTCGCTTCATTCGCCGTTTCTGGTTCGTTACTCTCTTTCCTGTTTTTCACACGCTCAATTTCAATTCTCAAccgctttttgttttttgcaggGACTCCGGCTGATTGCACTTCTCTCGGAATTTCCAAAGCACTCTTTCCTATAATACCTGATTTGGTAGTCAGTGGCATAAATAAGGGTAGCAACTGCGGCTATCATATTGTTTACTCAGGAACTGTAGCTGGTGCTCGAGAGGCCTTCTTCAATGATATCCCTTCTATCTCCATTTCATATGATTGGGTTGAAGGAAAGAGTAATCCACATGACTTTTCCCTTGCTGCACAAGTTTGCATTCCAATCATAAATGCTGTACTGGTTGAGATAAAGAACCAAAGCTACCCTGGACGATGTTTTTTGAATATAGATGTGCCAAACAGTGTTGCTAACCACAAGGGTTACAAGCTAACGAGGCAGGGTAAAAGTATCTTTAAGATGGGATGGAGGCAAGTCACCTCTGATACTGAAGGACGTATAATGTCATCTGATATGACCAATACAGATACACCTACAAATTCCGGCACATCATCTACATCCCCTGAACATCTTTTATTTGCGAGAGAGGCAAGAGGCTCCCTAcctgattatgatgatgatacAGATCACAAATCTTTGAAAGCAGGCTATaTTACTGTTACTGCTCTTGCTGCTCTCACTCATGCGGATCTTTATAATGCTAACCTAGGCAGTCTGGTTGCTCGAAAGTGCATTTATGACAAAATTACTGATGAAGATTTGGAATGCTGTCCAGTTTGCAACATTGATTTGGGCTGTGTTCCACTTGAGAAACTAAGGCTGGACCACAGTAAGCTAAACCTAAGGTACATACTTTTCCCTTCAAAGCGAAGAGAGGTGAAAGAACCTGAAGTTGTCGCCGCCTCAGTACCATTGTCAgctaaaagaaaagagaaatgtCTATCATCCTTGGTGTTCAACACACCAAGAGTATCTCCACAATCAACCATGACAGGAAGAACAAAACCTACAAGAAAAGCTAGCAGTCTGCGGCCCTCTAGTCCCGAGAGTTCAAGCTCGCCTGAAACTTCAAATAAGTTGCGTCAAAATAATGAACAACCTCAATCCTCTCAACCAGAAATTGATTTAGCTAAGCTCACTAGGGTCCTCAATGTCCCTGAACAAGAAAAAGCCAATACCTCTGTTGATGATCAGAATCAACAAGTTAATATTTCTAAAACCTCTATCTTATCATCTTCTGAAACCTTACTTGAACTACATTTTGACACCAACCTAGTCAATGAAACCTCTGTTGATAATCAACAAGTTGAGACACAGCCGGGAATCATCCCAGACATATCTCAAAATAAACCTCAACCACCAaaatcacctcaacataccatcacaccctcaaactctgaacctcaaccaattaactcaaatgaccctgatgtcttgagtgaatgcaacagcctattcaggcagatacatggtcttcatgagctgaggcaatctgatatgcctTCAGCTGAGTATGCTGCTAAATGGGTGAGCCTAACTGAAGAATTGGTGAAGGagctgtatagacttcaagaggctgatgttaaggagcagaagagttttgacaaaaatagtgctactgaagttgaagaggtcattcagattcagaaggacacagagaggaatcaacctgaatcctcttctgtaagagcaagtgatgagcaaaacctgatggagaagttagcatcacttgcggaagatctgaatgagcctattttggacaatttgggagcaaatcaagagcatttgagaaatccagtgtatgaggctgagattgaaagTATTAAAGCCGAGATGGCTAACTTGGATGACACCTCTCTTGAGGAATCTgattcatctggatcagatctctcttcctcaggagaagactctagtCCATCTGAGACTTGA | 2148 | 0.3198 | MEEGKRGTILITNDDGIDAPGLRALVDSLVNSNLFNIFVSAPDSEKSAVSHSITWLHPVAVKQVHIHGTVASFAVSGSLLSFLFFTRSISILNRFLFFAGTPADCTSLGISKALFPIIPDLVVSGINKGSNCGYHIVYSGTVAGAREAFFNDIPSISISYDWVEGKSNPHDFSLAAQVCIPIINAVLVEIKNQSYPGRCFLNIDVPNSVANHKGYKLTRQGKSIFKMGWRQVTSDTEGRIMSSDMTNTDTPTNSGTSSTSPEHLLFAREARGSLPDYDDDTDHKSLKAGYITVTALAALTHADLYNANLGSLVARKCIYDKITDEDLECCPVCNIDLGCVPLEKLRLDHSKLNLRYILFPSKRREVKEPEVVAASVPLSAKRKEKCLSSLVFNTPRVSPQSTMTGRTKPTRKASSLRPSSPESSSSPETSNKLRQNNEQPQSSQPEIDLAKLTRVLNVPEQEKANTSVDDQNQQVNISKTSILSSSETLLELHFDTNLVNETSVDNQQVETQPGIIPDISQNKPQPPKSPQHTITPSNSEPQPINSNDPDVLSECNSLFRQIHGLHELRQSDMPSAEYAAKWVSLTEELVKELYRLQEADVKEQKSFDKNSATEVEEVIQIQKDTERNQPESSSVRASDEQNLMEKLASLAEDLNEPILDNLGANQEHLRNPVYEAEIESIKAEMANLDDTSLEESDSSGSDLSSSGEDSSPSET | 715 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu05g00069 | 715 | MobiDBLite | consensus disorder prediction | 515 | 551 | - | - | |
Tsu05g00069 | 715 | MobiDBLite | consensus disorder prediction | 625 | 640 | - | - | |
Tsu05g00069 | 715 | PANTHER | 5'-NUCLEOTIDASE SURE | 4 | 78 | IPR030048 | GO:0008252 | |
Tsu05g00069 | 715 | PANTHER | 5'-NUCLEOTIDASE SURE | 99 | 304 | IPR030048 | GO:0008252 | |
Tsu05g00069 | 715 | PANTHER | OS07G0204500 PROTEIN | 99 | 304 | - | - | |
Tsu05g00069 | 715 | SUPERFAMILY | SurE-like | 8 | 304 | IPR036523 | GO:0016787 | |
Tsu05g00069 | 715 | MobiDBLite | consensus disorder prediction | 396 | 448 | - | - | |
Tsu05g00069 | 715 | MobiDBLite | consensus disorder prediction | 525 | 551 | - | - | |
Tsu05g00069 | 715 | Hamap | 5'/3'-nucleotidase SurE [surE]. | 7 | 322 | IPR030048 | GO:0008252 | |
Tsu05g00069 | 715 | MobiDBLite | consensus disorder prediction | 240 | 262 | - | - | |
Tsu05g00069 | 715 | PANTHER | OS07G0204500 PROTEIN | 4 | 78 | - | - | |
Tsu05g00069 | 715 | TIGRFAM | surE: 5'/3'-nucleotidase SurE | 8 | 237 | IPR002828 | GO:0016787 | |
Tsu05g00069 | 715 | Pfam | Survival protein SurE | 9 | 224 | IPR002828 | GO:0016787 | |
Tsu05g00069 | 715 | MobiDBLite | consensus disorder prediction | 692 | 715 | - | - | |
Tsu05g00069 | 715 | MobiDBLite | consensus disorder prediction | 622 | 641 | - | - | |
Tsu05g00069 | 715 | MobiDBLite | consensus disorder prediction | 685 | 715 | - | - | |
Tsu05g00069 | 715 | Gene3D | - | 8 | 322 | IPR036523 | GO:0016787 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu05g00069 | Tsu-Chr5 | 532878 | 543071 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu05g00069 | 314 | 450 | C3H Transcription Factor Family | AT2G30580 | 45.455 | 4.45e-30 | 120 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu05g00069 | K03787 | - | gmx:100808698 | 422.935 |