Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00068 atgaGCAATAATATTTGTAGACATtgtctctttctttctttgtcaTCTCAATCACTTCTTCAATTTCGTgtcttctctctcttgttccACATTGTTGCTGTTACTGCTTCTGTATCGTCACCATTCAGGATGGGAGAACCTGCATATACTGTGGCATCTGACAGTGAAACAACTGGGGAGGAAAAGACTTTACCTCTTCCTGAAATAGCAATTGGAATTGACATTGGCACCTCGCAATGCAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTTTgagaaacaaaagaaatcaGAAGCTTATGAAATCATTTGTCACTTTCAAAGATGAATCCCCTTCTGGTGGAGTCACCAGTCAACTCTCCCATGAGCATGAAATGCTGTCAGGAGATACAATTTTCAACATGAAACGTCTGATTGGAAGAGTTGACACTGACCCTGTAGTCCATGCAAGTAAAAATCTCCCATTTCTAGTGCAGACGTTGGACATTGGCGTTCGGCCCTTTATTGCTGCATTGGTGAATAATGTCTGGAGATCCACCACTCCAGAAGAAGTCCTTGCAATGTTTCTGGTGGAGTTAAGATTGATGACTGAATCTCATCTGAAACGACCGATAAGAAATGTAGTGCTTACGGTTCCGGTTTCCTTCAGTCGTTTCCAGCTGACTCGCCTTGAGCGTGCTTGTGCAATGGCTGGTCTTCATGTTCTCAGACTAATGCCTGAACCAACAGCAGTGGCATTGTTGTATGGGCAGCAACAACAGAAAGCTTCTCAAGAAATTATGGGTAGTGGAAGCGAGAAAATTGCTCTCATTTTCAATATGGGTGCGGGTTATTGTGATGTTGCTGTGACTGCTACCGCTGGAGGAGTATCCCAGATAAAAGCCTTGGCAGGAAGTACCATTGGTGGAGAAGATTTGCTTCAGAATATGATGCGTCATCTCTTACCGGATTCTGAAAATATATTCAAGCGTCACGGGGTTGAAGAAATTAAATCAATGGCATTGCTTCGAGTTGCAACCCAGGATGCAATTCACCAGCTTTCCACCCAAACAAGTGTTCAGGTCGATGTAGATTTGGGAGATGGTGTGAAGATATGCAAAGTTGTTGACAGGGCGGAGTTTGAGGAGGTGAACAAAGAGGTATTTGAAAAGTGTGAAAGCCTTATCATCCAGTGTTTACATGATGCAAAGGTAGAAGTTGAGGATGTAAATGATGCGATAGTTGTTGGTGGATGTTCTTATATCCCAAGGGTAAAGAATCTTGTTACCAAAATGTGTAAAGTAACAGAAGTTTATAATGGTATAAATCCTTTGGAAGGTGCGGTTTGTGGTGCAGCGATGGAAGGAGCTGTTGCTTCAGGCATTATTGATCCCTTTGGAAATTTGGACTTGTTAACCATTCAAGCCACTCCTCTTGCCATTGGAATTCGAGCCGATGGAAACAAGTTTGTCCCTGTAATTCCAAGGAACACGACAATGCCGGCGCGTAAGGATCTGCTTTTTACAACTATTCATGATAATCAAACTGAGGCATTGATACTTGTGTATGAAGGTGAGGGAAATAAGGCAGAAGAAAACCACCTGTTAGGATATTTCAAGATAATGGGAATACCTGCAGCACCCAAAGGAGTTCCTGAGATCAATGTCTGCATGGACATAGATGCTGCAAACGTGCTGAGAGTTTTAGCTGGTGTTGTGATGCCTGGATCTCGTACACCTGCAGTTCCTGTTATGGAAGTGCGGATGCCGATGGTTGATGATGGTCATGGTTGGTGTGCTGAGGCCTTAAATAGAACCTATGGTGCCACAATGGATTTGGTTACCCTCAAGAAGGCATGA 1842 0.4213 MSNNICRHCLFLSLSSQSLLQFRVFSLLFHIVAVTASVSSPFRMGEPAYTVASDSETTGEEKTLPLPEIAIGIDIGTSQCSVAVWNGSQVELLRNKRNQKLMKSFVTFKDESPSGGVTSQLSHEHEMLSGDTIFNMKRLIGRVDTDPVVHASKNLPFLVQTLDIGVRPFIAALVNNVWRSTTPEEVLAMFLVELRLMTESHLKRPIRNVVLTVPVSFSRFQLTRLERACAMAGLHVLRLMPEPTAVALLYGQQQQKASQEIMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPDSENIFKRHGVEEIKSMALLRVATQDAIHQLSTQTSVQVDVDLGDGVKICKVVDRAEFEEVNKEVFEKCESLIIQCLHDAKVEVEDVNDAIVVGGCSYIPRVKNLVTKMCKVTEVYNGINPLEGAVCGAAMEGAVASGIIDPFGNLDLLTIQATPLAIGIRADGNKFVPVIPRNTTMPARKDLLFTTIHDNQTEALILVYEGEGNKAEENHLLGYFKIMGIPAAPKGVPEINVCMDIDAANVLRVLAGVVMPGSRTPAVPVMEVRMPMVDDGHGWCAEALNRTYGATMDLVTLKKA 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00068 613 Gene3D Actin; Chain A, domain 4 304 385 - -
Tsu05g00068 613 SUPERFAMILY Actin-like ATPase domain 69 253 IPR043129 -
Tsu05g00068 613 SUPERFAMILY Actin-like ATPase domain 267 452 IPR043129 -
Tsu05g00068 613 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 47 612 - -
Tsu05g00068 613 CDD HSP70_NBD 71 451 - -
Tsu05g00068 613 Gene3D - 71 451 - -
Tsu05g00068 613 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 462 575 IPR029047 -
Tsu05g00068 613 Gene3D - 134 189 - -
Tsu05g00068 613 Pfam Hsp70 protein 70 564 IPR013126 GO:0005524|GO:0140662
Tsu05g00068 613 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 466 571 IPR029047 -
Tsu05g00068 613 PANTHER HEAT SHOCK PROTEIN 70KDA 47 612 IPR013126 GO:0005524|GO:0140662
Tsu05g00068 613 Gene3D - 255 433 - -
Tsu05g00068 613 PRINTS 70kDa heat shock protein signature 545 561 - -
Tsu05g00068 613 PRINTS 70kDa heat shock protein signature 209 229 - -
Tsu05g00068 613 PRINTS 70kDa heat shock protein signature 69 82 - -
Tsu05g00068 613 PRINTS 70kDa heat shock protein signature 464 483 - -
Tsu05g00068 613 PRINTS 70kDa heat shock protein signature 404 420 - -
Tsu05g00068 613 PRINTS 70kDa heat shock protein signature 436 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00068 Tsu-Chr5 522950 525987 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00068 70 564 Calmodulin-binding Proteins AT3G12580 37.352 9.40e-102 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00068 K09489 - gmx:100809773 985.326