Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00058 ATGGCTTCCTCAACAGACAATAATGGAGACAAGGTAATAGTCCACAACCTGCTCCCCCACATAGTTGTCTATAGTGACGGTACCATAGATCGTCCAAGAAACTTTCCATTTGTTCCACCACAAGAAGAGGACCCTGAAACCGGTGTCTCATCCAAAGACATTGTCTTTTCCAATGACCCTTACCTCACTGCTAGACTTTTCCTTCCAAAACTAACACAAAGCAATGGTCGGAACCAAAAACTCACCATCTTGGTTTATTTTCATGGTGGTGGATTGACCTTTGAATCAGCCTTTTCAAGCATCCACCACACATATTGCAATCTCATAGCTTCTCAAGCAAATGTTGTGATTGCTTCCATAGAACATAGAAAGGCTCCAGAGTATTATCTTCCCACATCTTATAATGATTGTTGGGCTGGTCTCTGTTGGGTTGCTTCTCATGCAACTCAAAATCCCATAAACAGTGACCCTTGGATCACCAATCATGGTGATTTTAATAGAATTTTTATTGGTGGTGATAGTAGTGGTGGCAACCTTGTTCACAATGTTGCTATGCGTGCTGGTGTTGAAGCTTTACCTGGCGGTGTCAAACTACTTGGTGCTTATCTTAACCACCCTTACTTATGGGGTGCAAAACCAATGGGGAAGGAACCTGTTATAGGATTTGAGGAGACTCTTCAATCTAGGATGTGGAAGTTTGCTTACCCTTCTGCTCCTGGTGGGTTAGATAACCCTATGCTCAATCCATTGGCTTATGGGGCACCAAGTTTGGCTACAATTGGTGGTTCTAGGCTGCTTATTACTGCCGCTGGCCAGGATCACCTTTTCTTTAGGGATAGAGCTGAAAGATATTATGAGGCTGTGAAGGAGAGTGGGTGGAAAGGGGAAGTCGAATTCTTTGAAGAGGAAGATGAGGATCATGTATATTTCATGTATGATACTAATTCAGAGAACTCTAAAAGATTGATAAAAATTGTGGTTGATTTTCTTCGCCGCTAA 999 0.4244 MASSTDNNGDKVIVHNLLPHIVVYSDGTIDRPRNFPFVPPQEEDPETGVSSKDIVFSNDPYLTARLFLPKLTQSNGRNQKLTILVYFHGGGLTFESAFSSIHHTYCNLIASQANVVIASIEHRKAPEYYLPTSYNDCWAGLCWVASHATQNPINSDPWITNHGDFNRIFIGGDSSGGNLVHNVAMRAGVEALPGGVKLLGAYLNHPYLWGAKPMGKEPVIGFEETLQSRMWKFAYPSAPGGLDNPMLNPLAYGAPSLATIGGSRLLITAAGQDHLFFRDRAERYYEAVKESGWKGEVEFFEEEDEDHVYFMYDTNSENSKRLIKIVVDFLRR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00058 332 Pfam alpha/beta hydrolase fold 84 310 IPR013094 GO:0016787
Tsu05g00058 332 Gene3D alpha/beta hydrolase 18 332 IPR029058 -
Tsu05g00058 332 SUPERFAMILY alpha/beta-Hydrolases 11 332 IPR029058 -
Tsu05g00058 332 PANTHER ARYLACETAMIDE DEACETYLASE 9 331 - -
Tsu05g00058 332 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 9 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00058 Tsu-Chr5 441712 442710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00058 10 331 Carbohydrate Esterase AT1G19190 33.746 1.15e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00058 - K13258 gmx:100814777 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00058 05 441712 442710 Tsu01g04609 01 53570660 53572183 PCT
Tsu01g04608 01 53563149 53564482 Tsu05g00058 05 441712 442710 PCT