Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00055 ATGGAATCTCAATTGGTTGATGGAAGTGACCAGACAGAAGTTTCTGGGGATGCTGATTTCGTGGAACCAAATGATGGGTGTAGATTGCAAGAGAATTATTCTGGGAGAGAATTGGGTAGCTCTCACCACGACCATGCTATTCAGGAACCATATGAAGGCATGGAATTTGCATCTGAAGATGCTGCTAAGATATTTTATGATGAATATGCCCGACATGTTGGATTTGTCATGCGTGTGATGTCTTGTCGACGGTCAGAAAGAGATGGTAGGATTCTTGCTCGCAGGCTTGGGTGTAATAAGGAAGGTCATTGTCTCAGCTTACGAGGAAAGCTTGGGCCAGTTCGGAAATCAAGGGCCAGCTCAAGGGAAGGTTGTAAGGCGATGATTCATGTCAAGTATGATAAATCTGGAAAATGGGTGATAACAAAGTTTGTGAAAGATCATAATCATCCACTAGTAGTCTCTCCACGTGAAGCACGGCAAACAATGGATGACAAGGATAAGAAAATTCAGGACCTAACAGCAGAACTTCGGATTAAGAAACGGTTGTGTGTAACTTATCAAGAACAGTTAACTTCTTTTATGAAAACTGTTGAAGAGCACAGTGACAAGCTGTCTACGAGAATTCATCACATACTTGATGATCTTAAAGAATATGAATCCATAGAAGAGCTTTTGCACCAGACATAG 690 0.4159 MESQLVDGSDQTEVSGDADFVEPNDGCRLQENYSGRELGSSHHDHAIQEPYEGMEFASEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLSLRGKLGPVRKSRASSREGCKAMIHVKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDDKDKKIQDLTAELRIKKRLCVTYQEQLTSFMKTVEEHSDKLSTRIHHILDDLKEYESIEELLHQT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00055 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 23 228 - -
Tsu05g00055 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 228 - -
Tsu05g00055 229 MobiDBLite consensus disorder prediction 1 25 - -
Tsu05g00055 229 Coils Coil 163 183 - -
Tsu05g00055 229 Pfam FAR1 DNA-binding domain 65 153 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00055 Tsu-Chr5 416566 419736 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu05g00055 FAR1 7.1e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00055 - - pvu:PHAVU_005G002900g 377.481