Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00051 ATGCGTTTCAAGATAAGAATAGGAAAAAGTATGATGAGTAGTAGTGTTGCGGAACTCTTTAAAGGATCACATTCATTTGGTCCAAATCCTTCATCATTTGATATTGAATCTGCCACAAACTCTCACTATGATTTACTTGGATCCTACCTTGGAAGTTCCGAAAAGGCCAAAGAAGCAATACTTTACtcttacaataaaaatattaatggaTTTGCTGCAATacttgatgaagatgaagcagCAGAGGTTGCAAAACATCCGAATGTAATATCAATTTTCTTAAGTAAAAACTACGAACTGATGACAACTCGATCGTGGGGATTCCTTGGATTAGAAAGAGATGGTCGATTTCCAATGGATTCATTGTGGAAGAAAACACTTGGAGACGACATTATTATTGGGAATTTAGACTCtgGTGTTTGCCCAGAATCCAAGAGTTTTAGTGACGAAGGATTCGGGCCAATCCCTAAAAAGTGGCGTGGAATATGTCAAGTTGCTAAGGAAAATCCAGATAAATTCTACTGCGCAACAGGTCTTTTACTCTCAATAATTTCTCcaagatatttttataaaggATATGCAGCATATACTCATGAAAATGTGTCATATACTAGTGCACGTGACACCGATGGTCATGGTACACATACTTTATCAACTGCTGGAGGTAATGCCGTTGCTGGAGTTAGTGTATTTGGCAATGGAAACGGAACAGCAAGTGGTGGATCACCAAAAGCGCGAGTTGCAGCCTATAAGGTTTGTGGGGATGCAGGATGTAATAATGCAGATATTTTGGCTGGTTTTGAAGCTGCCATAAGTGATGGTGTTGATGTTCTTTCGGTCTCTTTGGGCGGTTCTCCACACGAAGAATATGCCTCAGATAGTATTGCCATAGGATCTTTTCATGCAGTTGCCAACAACATCATTGTTGTAGCTGCTGGAGGAAATTCAGGACCTCAACTTCAAACTGTCACAAACTTGGAACCTTGGGTCCTCACAGTTGCTGCAAGCACAATTGATAGAGACTTAACAAGTTCTGTTGTTCTTGGTAACAAGAAAATACTCAagGGAGCTAGCCTTTCACAACTTGTCTTACCAGCTCATAAGTCATATCCATTGATAAATGCCGCTGATGCCAACCTTGATAATGCGTCACACGCAGATGCGCTTTTATGCAACAATGGAACTCTTGATCCTCATAAGGCAAATGGAAAAATTTTGGTATGTCTTCGAGGTGGTAGTAGTAGTAGAGTTGAAAAGGGTGTGCACGCTTCTACTGTAGGTGCTGTTGgaatgattttggctaataaTAAAGATTCAAAAGGAGAAGTTATGGCTGATCCTCATGTGCTTCCTGCTTCGCATGTTAACTTCACAGAAGGAAGATACATTTTTGATTATGTCACTAACACCAAGTCTCCCATGGCTTACATTACTAAAGTTGAAACACAATTGGGTGTAAATAGAGCTCCAATTATGGCTTCATTGTCATCAAGAGGCCCAAATGCACTTGATTCTGAAATCCTCAAGcCTGATATCACTGCACCAGGCATCAATATAATTGCAGCTTATAGTGAAGCTATATCTCCTACTGAAACAGAATTTGATAAGCGGAGAACTCCTTATATTACCATGTCAGGCACTTCAATGGCATGTCCTCATGTTGCTGGACTTGCAGGGCTGCTTAAAGCTCTTCATCCAGATTGGAGTGCAGCTGCTATCAAGTCAGCAATCATGACCACAGCAACAACAGAAGACAACGTCGGACAACATTTGTTGGATTCATCACTAGAAGAAGCAACTCCTTTTGAATATGGTGCAGGGCACATTCAACCTAATCTTGCTGCAGATCCTGGACTTGTTTATGACCTAAATATTACtgattatatgaattttttatgtggTCATGGATACACCAGTGGCAAACTTAAACTGTTCTACGGAAGACCTTACACTTGTCCCAAATCCTACAATTTAGCAACAGATTTCAATTATCCAAGCATCACAATTCCTCACATTACCCGTGGTGAAAATGTGACTGTTACTCGTACCGTAACCAATGTTGGGTCCCCTAGTACGTATACAGTGCTTATCAAGGCACCTGCAGAACTTTTAGTTTTAGTGGAGCCTAAGAGACTAATCTTTAAGGAAAAGGGTGAAAGAAAAGAGTTCAATGTTACATTAAACTGGACGAAAGAAACTAATTCGGGTATTGAAACGGTTCGGGCATTCAATAAAAACGGGTCACAGCTCCAACTCGTCCACGTTCTTCTTGTTCAACGCGGTTTCAATCTCTTTCAGatgACGAACTCCATATATGATGCATTAGCTTTAATCTCGGCAGTAAAAAGTGTGTTTAAAGACGACAATGGGGAAAAGTATGAAACTTTTTTAGAAGTTCTCAAGGATTTTAAGGCGGGAAAAATTGATAGAAGAGATGTCAAATATAGAGTGTATGAGTTGTTTAAAGGTCATCAAGATTTAATTTTGCGATTCAACAAATTCATGCCAACTCAATATGAGATCAAACTTCCAATGGATCATGATGATGATAAACCACAAGGACGCCAATTAGAGACAAACGATGCATTTGCATTTCTCAAGAAAGTAAAAGATGCGTTTCAAGGTAAGAATAGGGAAAAGTATGATGagtttttagaaattttaaaggATTTCAAGGCTCAAAGAATTCATACAAGTATTGTCGTGGAAAGAGTCAAGGAGATGTTTAAAGGGCATGCAGATTTAATTTCGGGATTCAACGTCTTCTTGCCAAACACATTTCAACTTCAGCTTGACACTGGGGAAAAAAGGAAGAAGTTAGCAGAGAACTGTGAAATTCCTTGGGATCTGCTTGATATCATTTCCAGAAAACTAGATTTTGACGACTTCTTCGAATTTGCTGGCTCAGAGGAATTTGTCTTTGTGGCTTTATGTAATAGCTCTGGTAGTTTGCATGTTTATCAATCTCAAAACTCTTGCTGGGTTACTTATTCAACAATAGGAAATCCATGGAAGGTTGTTGACTTTGTTGTTTTGTATAATACAATATATGTTGTCACTGACAAAGCCATCATAGGTGTACTCGACTTGAATACcgcaaatataaaatttttagaACTGAAGAGTACTCCTGCTGTAACATCTTCCTCACACCTAAGGTTGGTTAGTTGTGATGGACAACTTTTAGTGATTCATATTACATCTGAGGAAATATTGGATGTGTACAAGATAGACTTCTCAACCAAAAATTATGTCAAGCTGGAAACTTTGGGTGACATTGCATTATTTTATGCTTCGGGGGAATACTTCTATGCATTGAGCAACCCGAGAATGTGGGGTTATGAAACTAACTCTTTGCATGTCATCAATCTTTCATGTACAAAATGTATAGTTTGTGTGGGGGATGGCAACAAACTGCCAGAATACATTATGCACGATACGCATAGAGTTCCTCCAAAAGAGGGAGGCTACTTATTGGACTGGTGTTTCAAACATCTACACTATGAGGTGAACTATTCTCCAAGTTAA 3528 0.3784 MRFKIRIGKSMMSSSVAELFKGSHSFGPNPSSFDIESATNSHYDLLGSYLGSSEKAKEAILYSYNKNINGFAAILDEDEAAEVAKHPNVISIFLSKNYELMTTRSWGFLGLERDGRFPMDSLWKKTLGDDIIIGNLDSGVCPESKSFSDEGFGPIPKKWRGICQVAKENPDKFYCATGLLLSIISPRYFYKGYAAYTHENVSYTSARDTDGHGTHTLSTAGGNAVAGVSVFGNGNGTASGGSPKARVAAYKVCGDAGCNNADILAGFEAAISDGVDVLSVSLGGSPHEEYASDSIAIGSFHAVANNIIVVAAGGNSGPQLQTVTNLEPWVLTVAASTIDRDLTSSVVLGNKKILKGASLSQLVLPAHKSYPLINAADANLDNASHADALLCNNGTLDPHKANGKILVCLRGGSSSRVEKGVHASTVGAVGMILANNKDSKGEVMADPHVLPASHVNFTEGRYIFDYVTNTKSPMAYITKVETQLGVNRAPIMASLSSRGPNALDSEILKPDITAPGINIIAAYSEAISPTETEFDKRRTPYITMSGTSMACPHVAGLAGLLKALHPDWSAAAIKSAIMTTATTEDNVGQHLLDSSLEEATPFEYGAGHIQPNLAADPGLVYDLNITDYMNFLCGHGYTSGKLKLFYGRPYTCPKSYNLATDFNYPSITIPHITRGENVTVTRTVTNVGSPSTYTVLIKAPAELLVLVEPKRLIFKEKGERKEFNVTLNWTKETNSGIETVRAFNKNGSQLQLVHVLLVQRGFNLFQMTNSIYDALALISAVKSVFKDDNGEKYETFLEVLKDFKAGKIDRRDVKYRVYELFKGHQDLILRFNKFMPTQYEIKLPMDHDDDKPQGRQLETNDAFAFLKKVKDAFQGKNREKYDEFLEILKDFKAQRIHTSIVVERVKEMFKGHADLISGFNVFLPNTFQLQLDTGEKRKKLAENCEIPWDLLDIISRKLDFDDFFEFAGSEEFVFVALCNSSGSLHVYQSQNSCWVTYSTIGNPWKVVDFVVLYNTIYVVTDKAIIGVLDLNTANIKFLELKSTPAVTSSSHLRLVSCDGQLLVIHITSEEILDVYKIDFSTKNYVKLETLGDIALFYASGEYFYALSNPRMWGYETNSLHVINLSCTKCIVCVGDGNKLPEYIMHDTHRVPPKEGGYLLDWCFKHLHYEVNYSPS 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00051 1175 ProSiteProfiles Serine proteases, subtilase domain profile. 105 615 - -
Tsu05g00051 1175 Pfam Paired amphipathic helix repeat 791 834 IPR003822 GO:0006355
Tsu05g00051 1175 Pfam Paired amphipathic helix repeat 879 923 IPR003822 GO:0006355
Tsu05g00051 1175 Pfam Fibronectin type-III domain 661 738 IPR041469 -
Tsu05g00051 1175 Gene3D - 339 484 - -
Tsu05g00051 1175 SUPERFAMILY PAH2 domain 770 836 IPR036600 GO:0006355
Tsu05g00051 1175 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Tsu05g00051 1175 SUPERFAMILY PA domain 381 471 IPR046450 -
Tsu05g00051 1175 SUPERFAMILY PAH2 domain 852 925 IPR036600 GO:0006355
Tsu05g00051 1175 Gene3D Peptidase S8/S53 domain 130 628 IPR036852 GO:0004252|GO:0006508
Tsu05g00051 1175 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 101 IPR037045 -
Tsu05g00051 1175 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Tsu05g00051 1175 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Tsu05g00051 1175 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Tsu05g00051 1175 Pfam Peptidase inhibitor I9 34 101 IPR010259 -
Tsu05g00051 1175 ProSiteProfiles PAH domain profile. 855 926 IPR003822 GO:0006355
Tsu05g00051 1175 Gene3D - 632 748 - -
Tsu05g00051 1175 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 731 IPR045051 -
Tsu05g00051 1175 SUPERFAMILY Subtilisin-like 117 615 IPR036852 GO:0004252|GO:0006508
Tsu05g00051 1175 CDD Peptidases_S8_3 98 582 IPR034197 -
Tsu05g00051 1175 Gene3D Paired amphipathic helix 773 836 IPR036600 GO:0006355
Tsu05g00051 1175 Gene3D Paired amphipathic helix 861 924 IPR036600 GO:0006355
Tsu05g00051 1175 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 23 731 - -
Tsu05g00051 1175 CDD PA_subtilisin_like 345 477 - -
Tsu05g00051 1175 Pfam PA domain 389 461 IPR003137 -
Tsu05g00051 1175 Pfam Subtilase family 128 593 IPR000209 GO:0006508|GO:0008236
Tsu05g00051 1175 ProSiteProfiles PAH domain profile. 767 838 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00051 Tsu-Chr5 365835 377235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00051 19 736 Subtilisin-like Serine Gene Family AT5G59810 54.408 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu05g00051 Peptidase_S8 4.9e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00051 - - vun:114175516 891.338