Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00048 ATGGAGAGACATATCTCCATATACAGAACACCACCGGAAATACGTGGGGTCAAGATGGTTTTGGTTGTTGCTCTAGCAATCAAGGGTAATAAGAAAAGCAAATATGTTGTACAATGGGCACTTGATAAATTTGTTCATGAAGGGATAAGTATTTTCAAGCTTATTCATGTCAGAGCTGTTATAAATGGAGTTCCTACACCAATGGGAGATGTGCTTCCTATTTCACAAGTGCGAAATGATGTAGCAAATGCTTTCAGAAGGGAAGTGGAGTGGCAAACAAATCAAATGCTTCTACCTTTCAAGAGTTTGTGTGAGCAGAGAAAGGTGCATGTATATGTTGTAGTGATTGAATCAGATGATGTAGCAACTGCAGTAGCAGAGGAAGTATCTAAGAATGTTATTACCAAACTTGTTCTTGGAGCTTCATCTTCTGGTATATTTAAAAGAAAACATAAGGGTATGTCTGCGAAAATATCAGTACACACTCCAAGATTTTGTACAGTTTATGCTGTTTCGAAAGGAAAATTGTCCATACGGCAGTCAGATATGCAGACTGACGGAAACATTGTAGATGATACCACCAGTGAAACCAGTTTTTCCTCCAGCAGCTCATCGAACTACACTTCCGCCTCTCACTCTCAGACAGATCTTGGGAGAAAGAATGCGGATACAAGTTCTTCTAAAAACTCAGATATTGATCATGCTCTAAGCCAGGCCTCTAGTGGCGGAAGCATTTCAGATACCGAGTCTTCCATTTACGGTCAAAACTATGCAAAGTATGTGCCACAAGGTACTAAACTTCCAACACCAAATAGGCAGGAAAACTATAACCTTGAGCTGGAAAAGTTGCGAATTGAACTAAGACATGCACAAGGAATGCATGCAATAGCTCAAACTGAGAACATTGGTGCATAA 915 0.3989 MERHISIYRTPPEIRGVKMVLVVALAIKGNKKSKYVVQWALDKFVHEGISIFKLIHVRAVINGVPTPMGDVLPISQVRNDVANAFRREVEWQTNQMLLPFKSLCEQRKVHVYVVVIESDDVATAVAEEVSKNVITKLVLGASSSGIFKRKHKGMSAKISVHTPRFCTVYAVSKGKLSIRQSDMQTDGNIVDDTTSETSFSSSSSSNYTSASHSQTDLGRKNADTSSSKNSDIDHALSQASSGGSISDTESSIYGQNYAKYVPQGTKLPTPNRQENYNLELEKLRIELRHAQGMHAIAQTENIGA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00048 304 MobiDBLite consensus disorder prediction 182 248 - -
Tsu05g00048 304 PANTHER OS02G0152300 PROTEIN 20 303 - -
Tsu05g00048 304 CDD STK_N 22 174 - -
Tsu05g00048 304 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 168 - -
Tsu05g00048 304 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 20 303 - -
Tsu05g00048 304 Coils Coil 273 293 - -
Tsu05g00048 304 Gene3D HUPs 16 175 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00048 Tsu-Chr5 353704 357522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00048 183 304 U-box Gene Family AT4G25160 32.787 3.98e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00048 - - gsj:114409387 367.466