Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00015 ATGGAAATTTCAAACATGAGAAATTATTCTCAAGAACACGCATCATTACCCCCTAAAATCAGTAAATATGAAATAAGTGAATCATGTTTAGAAGGATTGATGTCACAATTAAGCAAAGAGTGCGGACCAAAGAGATATCATCGAACATATTCGGATAGCATGCTAGCATCTGAGcagcaacagcagcagcagcaggaAGTACCTTATTGGTTGAAAGATCTccttgatgatgatgatgatgatgataacgATGAGCCTGAAGAATCAGAAGAGAAGCTGCAGCCTAATACTAATAATGTACACAGCAACAACAGCAGCAGGTCTCATAGAAGATCATCAAGTGACTCCTTAGCATACttacataataaaaatattcttcAATATTCTCCAGAAAGGAAGGAACAAAATAATATGTATATTGTAGCTGCAGACCAACAACCCTCCATTCTGCACCAAAATCATCCTAGAACTGATCATTCAAAACGCGGAAAAAGGCATTCTGCTCAACAATATCGAGCGAGGAAAGTTCAATACATTGGAGAACTAGAAAGAAGTATCCAGGTTTTACAGGCAGAAGGATATGAAGTTTCAGCAGAGCTTGAATTTCTTGATCAGCAAAACCTCATTTTAGGTATGGAGAATAGGGCCCTCAAACAACGGTTGGACAGTTTATCCCAGGAGCACTTCGTCAAATGTTTGGAGCAGGAAGTGCTTGAGAGAGAAATCACAAGACTTAGAAATTtgtatcaacaacaacaacacaaacaacaacagcagcagcagcagcaaaaACATCATGGTAGGAGTCGATCTAAACAACGTCAAGATCTTGATTCATCAATTGCCAAACTTTCTCTGAAGAATAAGGGAACCGAATCATCGCAGAAAGCCAGATAG 897 0.3367 MEISNMRNYSQEHASLPPKISKYEISESCLEGLMSQLSKECGPKRYHRTYSDSMLASEQQQQQQQEVPYWLKDLLDDDDDDDNDEPEESEEKLQPNTNNVHSNNSSRSHRRSSSDSLAYLHNKNILQYSPERKEQNNMYIVAADQQPSILHQNHPRTDHSKRGKRHSAQQYRARKVQYIGELERSIQVLQAEGYEVSAELEFLDQQNLILGMENRALKQRLDSLSQEHFVKCLEQEVLEREITRLRNLYQQQQHKQQQQQQQQKHHGRSRSKQRQDLDSSIAKLSLKNKGTESSQKAR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00015 298 PANTHER - 152 289 - -
Tsu05g00015 298 SMART brlzneu 155 216 IPR004827 GO:0003700|GO:0006355
Tsu05g00015 298 MobiDBLite consensus disorder prediction 74 89 - -
Tsu05g00015 298 MobiDBLite consensus disorder prediction 1 20 - -
Tsu05g00015 298 MobiDBLite consensus disorder prediction 1 15 - -
Tsu05g00015 298 CDD bZIP_plant_RF2 164 207 IPR044759 GO:0003700|GO:0006355
Tsu05g00015 298 MobiDBLite consensus disorder prediction 93 117 - -
Tsu05g00015 298 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 152 289 IPR044797 -
Tsu05g00015 298 Gene3D - 152 231 - -
Tsu05g00015 298 SUPERFAMILY Leucine zipper domain 164 215 IPR046347 GO:0003700|GO:0006355
Tsu05g00015 298 MobiDBLite consensus disorder prediction 249 264 - -
Tsu05g00015 298 MobiDBLite consensus disorder prediction 278 298 - -
Tsu05g00015 298 Coils Coil 235 262 - -
Tsu05g00015 298 MobiDBLite consensus disorder prediction 249 298 - -
Tsu05g00015 298 PANTHER - 48 126 - -
Tsu05g00015 298 MobiDBLite consensus disorder prediction 74 117 - -
Tsu05g00015 298 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 48 126 IPR044797 -
Tsu05g00015 298 MobiDBLite consensus disorder prediction 146 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00015 163 231 bZIP Transcription Factor Family AT2G42380 52.174 3.53e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00015 - - mtr:MTR_3g005230 280.796