Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00009 ATGTATGGGAGAAAAGCTTGCCAACTTGTGAAAGAATTTGCAAGTGGAGAAAAGGGCCAGCTCACACCATTTAATAATGACTTGTTTGACCAAGTAGTTGCAGAATGCAGCCAACACCACGGTGCGCTCCAGTCCTTGATAAGGAAGATGCAGGAAGAAGGCTTGGATGTCCAAACTGCTAGAAATGCTGACCACTGCGGAGCCCTCATCCACCTATTTTCTATAGTCCGAAATAAACGTTGTCTAACAGCCTATGTGTATAACCGAGCAGAAACTATACAGAACTTGTTATGGAAGATAGGGCCCGTGATTCCtaaagaaattgaagagaagTTTGATCATTGGGAGGAAGAGTATTTCAAGAAGCATTCTTCAGCATTGAAATCTTATATGTCAAAAGTGCTGGTTGATCTGACTGGTAATCTCTCCCTCCCTTCTCCCTCACACACATCCACAGGTGATATGGTACCACCAAAAGATCCATACATCCAAGTAAGGGTTCTTGAAGACATAAGAGAAGGCATAGTACTTACTGATGATAAGAATCCCAATTTTGCCCGCCATTCAATGCATTTTCTGAAACGAACTGATGCTGAGAAATATATCTCACGGGGCTTAATGGAGGAGCTCACCGGTTGA 639 0.421 MYGRKACQLVKEFASGEKGQLTPFNNDLFDQVVAECSQHHGALQSLIRKMQEEGLDVQTARNADHCGALIHLFSIVRNKRCLTAYVYNRAETIQNLLWKIGPVIPKEIEEKFDHWEEEYFKKHSSALKSYMSKVLVDLTGNLSLPSPSHTSTGDMVPPKDPYIQVRVLEDIREGIVLTDDKNPNFARHSMHFLKRTDAEKYISRGLMEELTG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00009 212 Gene3D - 1 134 - -
Tsu05g00009 212 PANTHER PARTNER OF SLD5 1 208 IPR005339 GO:0000811|GO:0006260
Tsu05g00009 212 CDD GINS_A_psf1 3 134 IPR005339 GO:0000811|GO:0006260
Tsu05g00009 212 SUPERFAMILY GINS helical bundle-like 1 145 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00009 Tsu-Chr5 80840 83391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00009 1 212 Core DNA Replication Machinery Family AT1G80190 63.256 3.40e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00009 K10732 - qsu:112021696 312.768