Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04897 ATGTGGTATACAAAGCATTCactattctttttattcttcatcattcttttctcttctttgtTCCAATCACCTGTTTTTGCAGTCAAAAAGACTTACGTAGTGTACTTGGGGTCACATGAGCATGGTGAAGGAGTTATGGAAGCCGATTTCCATCGAGTTACAGAAACTCATCATAAATTTCTTCAATCCTATGTGGGAAGTTATGAGAAAGCAAAAGAGGCAATGATATATTCATACACAAGAAATATCAATGGCTTTGCTGCAATCCTTAATGAGAAAGAAGCTGCTGATATCGCAGAGCATCCAGATGTTGTGTCAGTGTTGTTAAACCGAGGAAGAAAGTTACACACAACACACTCATGGGAATTCATGTCAATGGAACACAATGGTGTGGTTCATTCCAAGTCCCTCTTTAGAAAAGCTAGATACGGTGAAGATGTTATAATCGGGAATCTTGACACTgGTGTATGGCCAGAATCTCCGAGCTTTAGAGATGAAGGGATAGGTCCCATTCCCTCAAGGTGGAAAGGAAAATGTCAGACCACTGACTTCCGTTGCAACAGGAAACTGATAGGAGCAAGGTACTTCAACAAAGGTTATTTGGCCTATGCAGGGCTAACGGCAACACAAAACAACACGCTTAACACTGCACGAGACTATGAAGGTCACGGATCTCACACATTGTCAACAATAGGAGGAAACTTTGTTTCTGGAGCTAATGTTTTTGGTTTTGGCAATGGAACTGCCAAAGGTGGTTCTCCAAAAGCCAGAGTTGCTGCTTACAAAGTTTGTTGGCCAAAAATTGATAACAGTGCATGTTTTGATGCTGATATCATGGCAGCCTTTGATATGGCTATTCATGACGGAGTAGATGTTCTTTCCCTTTCTATTGGAGGTGATCCCAATGATTACTTTGAGGATGTCCTTTCAATTGCTGCATTTCATGCTGTTAAGAAAGGTATCACTGTATTGTGTTCAGCTGGAAATGATGGACCAACACCTGGAACAGTTTCAAATGTTGCACCTTGGATATTAACTGTTGCTGCAAGCACCTTAGATAGAGAGTTTGATACTGCTGTTCAACTCCATAATGGACAAAGATTTAGGGGAGCTAGCCTTTCTGAAGCTTTGCCAGAAAACAAGTTTTACCCACTCATTATTGCTGCCAATGCAAAATTGGCAGATGCACCGGTAGAAAACGCTACGCTATGTCAGAGAGGAACAATTGACCCTAAAAAAGCAAGGGGCCACATCTTAGTTTGTTTGAGAGGTATTTCTGCAAGACTGGAAAAAAGCCTTGTTGCTTTTGAGGCTGGAGCAGTTGGAATGATTCTTTGTAATGACCAAGATAGTGGCAATGAGCTCATTGCTGATCCTCATTTCCTTCCATCGTCACAAATCACTTATGAAGACGGTGTTGCTGTCTTTGCCTACATCAATTCAACCAAAAATCCGCTAGGATATATTCATCCACCCATAACAAAGTTGAACATAAAACCTGCTCCAAACATGGCCGCTTTCTCCTCTAGAGGCCCCAACAAAATCACACCAGAGATTCTCAAGCCTGATGTAACTGCACCCGGTGTGAACATTATTGCTGCCTACTCAGGAGGGATTAGTCCTACAGAGATGGACTTTGATAAGCGCAGGGTTCCCTTCCTCACAATGTCTGGAACATCCATGTCATGTCCTCATGTGGCTGGAATTGTTGGTCTTCTCAAGACTCTCCACCCTACATGGAGTCCATCAGCTATTAAATCAGCAATTATGACAACTGCTAGGACAAGGAGCAATAGTGCTAAACCAATCCTTGACGCTAATGTGAAGGCAACACCATTTGCTTACGGCTCAGGTCACATTCGACCAAATCGTGCCATGGATCCTGGCTTGGTCTATGAGTTGAATATCAATGATTACCTAAGCTTTCTTTGTTTCATTGGTTATAACCAGACACAAATTAGCATGTTCTCCGGTACTCGTTATCATTGTGATGATATAAACATCCTGGATTTCAACTACCCTACAATAACAATACCTAAACTCTATGGTTCAGTTACTTTGAGGAGGAAGCTGAAAAATGTTGGTCCACCAGGAACATACAATGCAACCTTACGTGTACCGGCTGGAGTTTCCATATATGTGCAGCCAAATATCTTGAAATTTGACAACATTGGTGATGAAAAGAGTTTTAATTTAACAGTTGAAGTTAAAAGATCAGGTTTGGCTACTGTCTTTGGAGGCCTAACTTGGTCAGATGGCATACACTATGTTAGGAGTCCAATTGTAGTTGGAGGAGTTAAAGGTTAA 2307 0.4096 MWYTKHSLFFLFFIILFSSLFQSPVFAVKKTYVVYLGSHEHGEGVMEADFHRVTETHHKFLQSYVGSYEKAKEAMIYSYTRNINGFAAILNEKEAADIAEHPDVVSVLLNRGRKLHTTHSWEFMSMEHNGVVHSKSLFRKARYGEDVIIGNLDTGVWPESPSFRDEGIGPIPSRWKGKCQTTDFRCNRKLIGARYFNKGYLAYAGLTATQNNTLNTARDYEGHGSHTLSTIGGNFVSGANVFGFGNGTAKGGSPKARVAAYKVCWPKIDNSACFDADIMAAFDMAIHDGVDVLSLSIGGDPNDYFEDVLSIAAFHAVKKGITVLCSAGNDGPTPGTVSNVAPWILTVAASTLDREFDTAVQLHNGQRFRGASLSEALPENKFYPLIIAANAKLADAPVENATLCQRGTIDPKKARGHILVCLRGISARLEKSLVAFEAGAVGMILCNDQDSGNELIADPHFLPSSQITYEDGVAVFAYINSTKNPLGYIHPPITKLNIKPAPNMAAFSSRGPNKITPEILKPDVTAPGVNIIAAYSGGISPTEMDFDKRRVPFLTMSGTSMSCPHVAGIVGLLKTLHPTWSPSAIKSAIMTTARTRSNSAKPILDANVKATPFAYGSGHIRPNRAMDPGLVYELNINDYLSFLCFIGYNQTQISMFSGTRYHCDDINILDFNYPTITIPKLYGSVTLRRKLKNVGPPGTYNATLRVPAGVSIYVQPNILKFDNIGDEKSFNLTVEVKRSGLATVFGGLTWSDGIHYVRSPIVVGGVKG 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04897 768 ProSiteProfiles Serine proteases, subtilase domain profile. 120 626 - -
Tsu04g04897 768 SUPERFAMILY Subtilisin-like 115 630 IPR036852 GO:0004252|GO:0006508
Tsu04g04897 768 SUPERFAMILY PA domain 409 482 IPR046450 -
Tsu04g04897 768 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Tsu04g04897 768 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Tsu04g04897 768 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Tsu04g04897 768 Pfam Peptidase inhibitor I9 31 116 IPR010259 -
Tsu04g04897 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Tsu04g04897 768 Pfam Subtilase family 144 617 IPR000209 GO:0006508|GO:0008236
Tsu04g04897 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Tsu04g04897 768 PANTHER BNAC02G33520D PROTEIN 16 764 - -
Tsu04g04897 768 PANTHER PEPTIDASE S8 16 764 - -
Tsu04g04897 768 Gene3D - 643 765 - -
Tsu04g04897 768 Gene3D Peptidase S8/S53 domain 146 639 IPR036852 GO:0004252|GO:0006508
Tsu04g04897 768 Pfam PA domain 404 473 IPR003137 -
Tsu04g04897 768 Coils Coil 767 768 - -
Tsu04g04897 768 Gene3D - 353 496 - -
Tsu04g04897 768 CDD Peptidases_S8_3 114 593 IPR034197 -
Tsu04g04897 768 CDD PA_subtilisin_like 360 489 - -
Tsu04g04897 768 Pfam Fibronectin type-III domain 670 763 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04897 Tsu-Chr4 55825883 55830815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04897 19 763 Subtilisin-like Serine Gene Family AT5G59810 62.850 0.0 968