Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04870 ATGAAGCTCCACTACCTTAACTCATTGTGTCTTCTTGTGATCATCTTGGATCTAAGTACCAATATCTATGGTCTCTCATCACAACTTGTgcccaaaaatatattgaagccCTTATTACCACCTCCTGAAGCCTTACTATCAATTGGTCACTATCATGGAACATGTCCAGATGCTGAAGGCATTATCTCACAAAAAGTTGCTGCTTGGATTAAGAAGGATCCTACCTTGGCCCCATCCATCATCCGTTTGCATTTCCATGATTGTGCCATCAGAggatgtGATGCATCAATTTTACTTAACCACTTAGGGAGTGAGAGAAAAGCTTTTGAGAGTAGAACCTTGAGAGGTTTTCAATTGATTGACGAAATCAAGGTTGAGCTAGAGAAAAGGTGTCCAAGAACAGTGTCATGTGCTGACATTCTCACTGCTGCTGCAAGAGATGCAACAATTTTAGCTGGAGGACCATTTTGGGAAGTTCCATTCGGCCGAAAAGACGGCAAGATTTCATTGGCCAAAGAAGCAAATTTGGTTCCACAAGGACATGAAAACATCACAGGTTTGATTGGTTTTTTTCAAGAAAGAGGACTTGACATGCTTGATTTGGTTACTCTCTCAGGTTCACACACAATTGGGAGAAGCACTTGTTATTCTGTTATGAATAGGATTTACAATTTCAATGGAACTGGTAAACCTGATCCTTCACTTAACATGTATTACTTGAAGTTGTTGAGGAAAAGATGTAAAAAAGATTTGGATTTGGTGCACCTTGATGTTATAACTCCTAGGACTTTTGACACAACATATTACACAAACCTTAAGAGGAAAGTTGGTTTGTTGTCAACAGATCAATTGTTGTTTTCAGATGAAAGGACAAGTCCTTTTGTGGAAGCATTTGCAACACAAGCTTTTCTTTTTACTAGTCAATTTGCTGTGTCAATGGTGAAGCTTGGGAATGTTCAAGTTTTGACTAGGCCTAATGAAGaacaacaacaacaacaacttgaTCTACTCGAATCAACCAACCTTCCTCTCAGCTCCTCAGggcctAGTATCTTAGATCTTCAACTTTTCAAGTAA 1077 0.3714 MKLHYLNSLCLLVIILDLSTNIYGLSSQLVPKNILKPLLPPPEALLSIGHYHGTCPDAEGIISQKVAAWIKKDPTLAPSIIRLHFHDCAIRGCDASILLNHLGSERKAFESRTLRGFQLIDEIKVELEKRCPRTVSCADILTAAARDATILAGGPFWEVPFGRKDGKISLAKEANLVPQGHENITGLIGFFQERGLDMLDLVTLSGSHTIGRSTCYSVMNRIYNFNGTGKPDPSLNMYYLKLLRKRCKKDLDLVHLDVITPRTFDTTYYTNLKRKVGLLSTDQLLFSDERTSPFVEAFATQAFLFTSQFAVSMVKLGNVQVLTRPNEEQQQQQLDLLESTNLPLSSSGPSILDLQLFK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04870 358 CDD secretory_peroxidase 47 323 IPR033905 GO:0004601|GO:0042744
Tsu04g04870 358 SUPERFAMILY Heme-dependent peroxidases 46 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 Gene3D - 49 326 - -
Tsu04g04870 358 Gene3D Peroxidase, domain 2 178 316 - -
Tsu04g04870 358 ProSiteProfiles Plant heme peroxidase family profile. 45 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 Pfam Peroxidase 63 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PANTHER PEROXIDASE 27 326 - -
Tsu04g04870 358 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Tsu04g04870 358 PANTHER PEROXIDASE 25-RELATED 27 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601
Tsu04g04870 358 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Plant peroxidase signature 79 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04870 358 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04870 Tsu-Chr4 55631701 55640262 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04870 41 323 Peroxidase AT1G30870 50.704 2.38e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04870 K00430 - gmx:100792775 530.02