Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04868 ATGGAATTCaaatctttcttcttcatcatttccTCATTCATCTTCTTTCTGTTTTGGCTAGCAAAGATATATAAACACAAAATCCATAAACTTCCACCAGGGCCATGGAAGCTTCCTCTAATAGGAAACTTGCATCAACTGGCATTTGCAGGATCACTTCCACACCATACACTTGGAAATCTATCCAAAAAATATGGACCTCTTATGCATCTTCAACTAGGTGAAATTTCAGCAGTAGTTGTTTCATCTCCTGATATAGCCAAAGAAATCATGAAAACACATGATCTTTCTTTTGTTCATAGGCCAGAACTTCTCTGTCCTAAAATACTAGCCTATGAATTCACCGACATCGCTTTTGCTCCATATGGTGATTATTGGAGACAGATGAGAAAAATATGTACATCAGAACTTCTTAGTGCTAAAAGGGTTCAGTCTTTTTCTTCCATTAGAGAAGATGAAGTACAAAAGCTTGTACAATCCATTTCTGAAGGTTCACTTTCATTATTACCACTTAATcttactaaaataattttctctttgGTAAGCACTTTTGTTACAAGGGCAGCATTTGGTAAAAAATCTGAATTCGAAGATGAACTTTTGTGTTTGTTAAAGGACGGAAGTGAATTGACAGGTGGATTTGATGTTGCTGATTTGTTTCCGTCGTTTAAACTTATTCATTTTGTTACCGGGATGAAAACTAAATTGGAGAAGATGAAAAAGAAGCTGGATAAGATATTAGTAAGCATCATCAAAGAGCatcaatcaaattcaaaccGTGATGGACTGCATCATGGTGAAAATCTAGTTGATGTTCTTTTGCGTGTTCAGCAAAGTAGCAATCTCGACATCCCAATCACAGACGACAATGTCAAAGCCGTCATATGGGATGTGTTTGGCGCTGGGACTGATACTTCATCAACAACATTAGAGTGGGCTATGTCAGAATTGATGAAAAACCCGAAAGTGAGGAAGAAGGTACAATCGGAAATCAGGGGAGCCTTTAAGGAAAAGAAGAGAATTTACGAGAGTGATCTAGATAAACTTAGTTACTTCAAGTCGGTGATCAAAGAAACAATGAGGTTACATCCACCTGCTCCTTTGTTGCTTCCAAGAGAGTGTAGAGATGCTTGCAACATAGGTGGGTATGAAATACCTTTAAAGACTAAAGTCATAGTAAATGCATGGGCGCTTGGAAGAGATCCCAAATATTGGTATGATGCAGAGAGGTTTATCCCTGAGAGGTTTGATGGCACTAGTTACGATTTTAATAAAACCAATAATAGCTTCGAGTATATACCTTTTGGAGCAGGAAGAAGAATCTGTCCAGGAATTTTATTTGGCTTAGCTAGTATTGAGCTTCCTTTAGCTGCATTATTGTACCACTTTGATTGGGAACTTCCTAATGGAATGAAACTAGAGGACTTGGATATGACAGAAGCCTTTGGAGCTGCTGCGACTAGGAGGAACGATCTGCATTTGATTCCAACTCCATATATTTGA 1503 0.3666 MEFKSFFFIISSFIFFLFWLAKIYKHKIHKLPPGPWKLPLIGNLHQLAFAGSLPHHTLGNLSKKYGPLMHLQLGEISAVVVSSPDIAKEIMKTHDLSFVHRPELLCPKILAYEFTDIAFAPYGDYWRQMRKICTSELLSAKRVQSFSSIREDEVQKLVQSISEGSLSLLPLNLTKIIFSLVSTFVTRAAFGKKSEFEDELLCLLKDGSELTGGFDVADLFPSFKLIHFVTGMKTKLEKMKKKLDKILVSIIKEHQSNSNRDGLHHGENLVDVLLRVQQSSNLDIPITDDNVKAVIWDVFGAGTDTSSTTLEWAMSELMKNPKVRKKVQSEIRGAFKEKKRIYESDLDKLSYFKSVIKETMRLHPPAPLLLPRECRDACNIGGYEIPLKTKVIVNAWALGRDPKYWYDAERFIPERFDGTSYDFNKTNNSFEYIPFGAGRRICPGILFGLASIELPLAALLYHFDWELPNGMKLEDLDMTEAFGAAATRRNDLHLIPTPYI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04868 500 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 499 - -
Tsu04g04868 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Tsu04g04868 500 Pfam Cytochrome P450 32 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 Gene3D Cytochrome P450 24 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g04868 500 PANTHER CYTOCHROME P450 71B11-RELATED 7 499 - -
Tsu04g04868 500 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04868 Tsu-Chr4 55625086 55626717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04868 12 500 Cytochrome P450 AT3G26300 43.227 8.99e-145 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04868 - K15472 gmx:100794503 728.783