Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04864 ATGCAAAGGCAATTCTATCACCAATCTGATTTTTCTTTCGGAACAATGAAGGAGGAATGTTTCCCCCTGGAATCATACCCTGAAATCGCTTCTTTCATAGATTGTGATTCTCCTTCATATGCCAGTGTATCATCTAACAAGAGTCCATTTTCTCCACAAGATTCTCAATCTCAGTCATGCCATTCAGATCACCAGCAATCATCTGACAACACTTATGGATCGCCAATAAGTGGGATGTCCAGTGTTGACGATGGCCATGATTTGAAGCATAAACTTAGAGAACTGGAGAATTCATTGTTGGGGTCTGATGATTTCGATATTGTTGACAGTTATGGAAACTGCATGGAGACTAGCCTCCACGGAGCATCTCCATCGGCTAAATATGATTGGGATCTAATTGCAGAAAACATTCCAAAGCTTGACTTGAAAGAAGTCCTCTTGCTATGTGCACAGGCTGTGTCTGATGGTGATATTCCAACAGCAAGAGGCTGGATGGATAATGTATTGGCGAAGATGGTATCAGTCGCTGGAGATCCAATCCAAAGGTTAAGTGCTTACTTGTTGGAAGGGCTTAGAGCTAAATTAGAATCGTCTGGAAGCTTGATCTACAAGGCGTTGAAATGTGAACAACCAACGAGCAAAGAACTATTGAGTTACATGCACGTCCTGTATCAGATTTGTCCATATTTTAAGTTTGCATACATATCTGCAAATGCTGTTATTTCTGAAGCAATGGCAAATGAATCCAGGATTCATATAATTGATTTCCAAATTGCACAGGGAACACAGTGGCTTCTACTTATTCAAGCGCTTGCAAACAGGCCTGGCGGACCACCTTTTATTCGAATAACAGGTGTCGACGATTCACAATCACTTCATGCGCGCGGTGGAGGACTTCAGATTGTAGGAGAAAGGATTTCAGACTATGCCAGATCTTGTGGAGTTCCGTTTGAGTTCCACAACACTGCAATGTCTGGTTGCGAAGTCCAACGAGAAAATCTTGAAATTAGACCTGGAGAAGCCCTTGCCGTCAATTTTCCCTATTTTTTGCACCATATGCCGGATGAGAGTGTGAGCATAGAGAACCATCGAGACAGATTGTTGAGATTGGTTAAGAGTTTGTCTCCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAATACTTCTCCATTTTTTCATAGGTTTGTGGAGACAATGGATTATTACACAGCTATGTTTGAATCAATAGATGTAGCTTGTGCCAAAGACGATAAGAAGCGGATTAGTACGGAGCAGAACTGCGTAGCACGGGACATTGTTAACATGATAGCCTGTGAGGGGGTTGAAAGGGTGGAGAGGCATGAAGTTTTTGGAAAGTGGAGGATGAGATTTTCCATGGCTGGATTTAGACAATGCTCATTGAGTTCTTCAGTGATGCATTCTGTCCAAAATTTGTTGAAGGACTACAATCAAAATTATAGACTGGAACATAAAGATGGTGCTCTCTATCTTGGTTGGATGAAGAGAGCTATGGCCACCTCTTCTGCTTGGAGATGTAACTGA 1548 0.4205 MQRQFYHQSDFSFGTMKEECFPLESYPEIASFIDCDSPSYASVSSNKSPFSPQDSQSQSCHSDHQQSSDNTYGSPISGMSSVDDGHDLKHKLRELENSLLGSDDFDIVDSYGNCMETSLHGASPSAKYDWDLIAENIPKLDLKEVLLLCAQAVSDGDIPTARGWMDNVLAKMVSVAGDPIQRLSAYLLEGLRAKLESSGSLIYKALKCEQPTSKELLSYMHVLYQICPYFKFAYISANAVISEAMANESRIHIIDFQIAQGTQWLLLIQALANRPGGPPFIRITGVDDSQSLHARGGGLQIVGERISDYARSCGVPFEFHNTAMSGCEVQRENLEIRPGEALAVNFPYFLHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGVERVERHEVFGKWRMRFSMAGFRQCSLSSSVMHSVQNLLKDYNQNYRLEHKDGALYLGWMKRAMATSSAWRCN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04864 515 MobiDBLite consensus disorder prediction 44 78 - -
Tsu04g04864 515 MobiDBLite consensus disorder prediction 44 85 - -
Tsu04g04864 515 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 512 IPR005202 -
Tsu04g04864 515 ProSiteProfiles GRAS family profile. 133 513 IPR005202 -
Tsu04g04864 515 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 9 512 - -
Tsu04g04864 515 Pfam GRAS domain family 142 513 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04864 Tsu-Chr4 55602757 55606126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04864 2 515 GRAS Transcription Factor Family AT4G17230 60.542 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu04g04864 GRAS 3.3e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04864 - - gmx:100776109 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04864 04 55602757 55606126 Tsu08g03425 08 52088450 52089995 PCT