Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04835 ATGAAAGCCTCAAAGCAACAAAGAGGATGCAAGGCCTTGTGTTGTAGCAGCAATAGGTTTagtgtttcttcttcttcagagGAAGCAGAGAGTTCTTCTTCTGCCTCTAATAAGTTTCCTTCTGTTTCTACACTAGCACATGCTATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAAGCTTGAAGCTAGATATGTAGAGAGAAGAAGGGAGCAGCGAAGAAGATCAGAAGGAACTAAGTTTGTTGTAATGTTAGCTATGGAAAAATGTTCTTATGATCCTAGAGAGGATTTTAGGGAGTCGATGATGGAAATGATAACTGTGAATCGCCTTCAAGACGCGAAAGATCTTCGTAGTTTATTGAACTATTATATGTCGATGAATTCAGAAGAATATCACAGTCTTATACTTGAAATTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATGGAGTAAATGCAAATGGTGA 474 0.3565 MKASKQQRGCKALCCSSNRFSVSSSSEEAESSSSASNKFPSVSTLAHAMVQERLDQMIREKLEARYVERRREQRRRSEGTKFVVMLAMEKCSYDPREDFRESMMEMITVNRLQDAKDLRSLLNYYMSMNSEEYHSLILEIFHEVCTNLFLSWSKCKW 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04835 157 PANTHER TRANSCRIPTION REPRESSOR-RELATED 7 150 - -
Tsu04g04835 157 ProSiteProfiles OVATE domain profile. 88 147 IPR006458 -
Tsu04g04835 157 MobiDBLite consensus disorder prediction 19 38 - -
Tsu04g04835 157 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 150 IPR038933 GO:0045892
Tsu04g04835 157 Pfam Transcriptional repressor, ovate 92 149 IPR006458 -
Tsu04g04835 157 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 87 149 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04835 Tsu-Chr4 55405260 55405733 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu04g04835 Ovate 1.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04835 - - var:108330150 199.519