Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04833 ATGCTGAATATTGGATTGCTTATAAGGTGGGAATTTTCGACACCAGTACAGTTTATCATAGGAAGAAGATTCTATGTTGGAGCTTATAAAGCTTTGAGAAAAGGTTATGCCAACATGGATGTTTTGATAGCATTGGGAACAAATGCAGCTTATTTCTATTCTGTCTATGTTGTTGGAAGAGCTGTTTTTTCTTCGCATTTCAAAGGAAGTGATTTTTTCGAAACAAGTTCTATGCTAATTTCTTTTATTCTACTTGGGAAGTATTTGGAAGTGTTGGCTAAAGGGAAAACATCACAGGCTATTGCGAAACTTATGGATTTGACACCTGATACAGCAATCTTATTAACTCAAGATGATAAGGGAAATGTTATAGGTGAAAGAGAAATTGATAGTAGGTTGATACAGAAGAATGATGTGATCAAAGTTGTGCCGGGCGCAAAAGTAGCATCGGATGGTTTTGTTGTTTGGTGA 471 0.3609 MLNIGLLIRWEFSTPVQFIIGRRFYVGAYKALRKGYANMDVLIALGTNAAYFYSVYVVGRAVFSSHFKGSDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMDLTPDTAILLTQDDKGNVIGEREIDSRLIQKNDVIKVVPGAKVASDGFVVW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04833 156 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 1 156 - -
Tsu04g04833 156 PANTHER ATP7, ISOFORM B 1 156 - -
Tsu04g04833 156 Gene3D - 94 156 - -
Tsu04g04833 156 PRINTS Copper-transporting ATPase signature 24 43 - -
Tsu04g04833 156 PRINTS Copper-transporting ATPase signature 76 95 - -
Tsu04g04833 156 PRINTS Copper-transporting ATPase signature 96 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04833 Tsu-Chr4 55390932 55391402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04833 1 156 Primary Pumps ATPases AT1G63440 76.282 3.46e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04833 K17686 - gmx:100817431 271.937