Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04831 ATGGTCAAAATGAGTTCCATAGCTTTACTATTATCCCTAATCACTTTCATTTTGATCTTCTTGGTTTCTATAACTTGTTGCTCTCAAGAAGATCGATCTATATACTTGGTCTTATTGGAAGGAGATGCGGTTGCATTTCATGGAGCTTCACAAAATGATGGTTCATCAATGGTTCACCTCACCAGgaaaatatttttcttttctgaatATATTATAGACTATTTCTTTACTACAAAATCTTTTAGAATCTGCCACTATAGTACTTACACTAAAGTTGTTGAATTCATTGGCAAAAAATATCAGGCAAAAAGACTGAGAGCTACACCAGGAGTGAAGTTGGTAGAGAAAGACAGAGGAGTGAAACTAATGACAACATATACTCCTGATTTTCTTAAGTTACCACAAGGAGTATGGGCACAAGAAGGAGGACAAAAAAATGCAGGTGATGGAGTTGTTATTGGTGTTATTGACAGTGGCATTAATCCACTTCATCCAAGTTTTGGTTCTCAACATTTCACTTCAAATGTCTCTCACTTTTCTGGTGCTTCTTGTATGACTGGTCCACACTTTCCACCTGGTTCTTGCAATGGAAAGATTATTTCAGCTAAGTATTTTTCAGCTGGTGCTCAAGCTGCTGCTAACTTGAACGCTTCTGTCGATTTTCTTTCACCCTATGATGCTGATGGACATGGCAGTCATGTATCATCTATTGCTGCTGGAAATGCTGATGTTCCTGTTATAGTGAATGATTTTTGCTATGGACGAGCCAGCGGAATGGCACCGCGTGCAAGGATTGCAGTTTATAAAGCTATCTACCCATCTGTGGGAACTCTAGCAGATGTTGTCGCAGCTATCGATCAAGCTGTTCGAGATGGGGTAGATATCATATCACTATCTATTGGACCAAGTAAAGCAGCAGAAGATACATTGACTTTTCTCAGCATCTTTGATATTACCTTATTATTTGCAAGAAAAGCGGGAGTTTTCGTGGCACAAGCTGCAGGTAATAGTGGTCCATCATCTTCAACCGTAGTGTCATTTAGTCCTTGGAGTGTCGGTGTTGCTGCGTGCAACACAGACAGAAGATATACTGCTTCAATTATTCTTGGAAATGGCACAGTGGTTGATGGCGTTGGATTGTCAGGACCAACTTTTGGAAATGGGACAGTTTTCCATAAACTTGTATTAGCAAAAGATGCATTAAAAACAAATGGAACATTTCCAAGGACACCAGAGTACATAGAAGAATGCCAACATCCAGAAGCTTTCGATCCTACTAAAGTGTTTGGAAGTGTCATTATCTGCAAATTCTCAGAAGGATTCCTTAATGGCACCTCAACACTTTCTAACATTATCGAAACCGCCAAGGCCCTGAAATTTGAGGGTTTTATTCTGACTGCAATCCCGCGCTATGGCGATTATATTGCAGAGCCAGTTCTCTTTGCTATTTCTggtatcttgatttcttctgtAGCAGATTCCAAGGTTATAATGCAATATTACGAAAATCGAACAAAGAGGGACGAGAAAGGAACTATTATAGAATTTGGTGCTTGGGCATCTACAGGGGAAGGAAGGGTTGCCTCTTTCAAAGGGCGATCACCGGTTGTTAGCAGATTTTCTTCAAGGGGTCCAGATATCATTGATGCAAACAGAAGTCTTGCTGATGTACTTAAACCTGATGTTCTTGCTCCAGGACACCAGATATGGGGTGCATGGAGCCCTATTAGTGCCAAACTACCTATGCTAACAGGACACAATTTTGCATTATTATCTGGTACCAGCATGGCGGCGCCTCATGTGGCTGGAATCGCAGCATTAATCAAGCAACATAATCCATCATGGACTCCATCTATGATAGCATCTGCAATCACCACAACAAGCTCAAAATATGACAATCTTGGAGATCCTATGATGGCCGAAGGCTATGAGCCCCACTCATTGCATCGTTCCACTCCTTTCGAATATGGAGCGGGCATTGTCAACCCCAGCCGTGCCATTGATCCAGGCCTGGTACTGTCAACAGATTATGTAGATTTCATCAGCTTCCTATGCTCTTTGCCAAACATCGATGCGAATACAATAACTACAGCAACGGGAGAACCTTGCAAGAGTCCATTTGACTATCCATCTAATTTAAACCTTCCATCAGTAACAATATCTGAACTGAAAGGATCGATGTATGTGAGAAGAACTGTGATGAATGTAGGGAACAGCACAGAGACATACTTGGGATCTGTTCTAGCTCCTAATGGAACTACAGTTAATCTGAATCCAACATGGTTTACCATAAGTCCACAAGGAACACTAGATCTGGATATACAAATCAATGTCGTTCAACCAATAAAAGACTTTCGCTTTGGCGAAATTGTTTTGACAGGAAGTATGGACCATATAGTAAGAATAACTTTATCAGTTGTGCCAGTTTCAGCATAA 2436 0.4027 MVKMSSIALLLSLITFILIFLVSITCCSQEDRSIYLVLLEGDAVAFHGASQNDGSSMVHLTRKIFFFSEYIIDYFFTTKSFRICHYSTYTKVVEFIGKKYQAKRLRATPGVKLVEKDRGVKLMTTYTPDFLKLPQGVWAQEGGQKNAGDGVVIGVIDSGINPLHPSFGSQHFTSNVSHFSGASCMTGPHFPPGSCNGKIISAKYFSAGAQAAANLNASVDFLSPYDADGHGSHVSSIAAGNADVPVIVNDFCYGRASGMAPRARIAVYKAIYPSVGTLADVVAAIDQAVRDGVDIISLSIGPSKAAEDTLTFLSIFDITLLFARKAGVFVAQAAGNSGPSSSTVVSFSPWSVGVAACNTDRRYTASIILGNGTVVDGVGLSGPTFGNGTVFHKLVLAKDALKTNGTFPRTPEYIEECQHPEAFDPTKVFGSVIICKFSEGFLNGTSTLSNIIETAKALKFEGFILTAIPRYGDYIAEPVLFAISGILISSVADSKVIMQYYENRTKRDEKGTIIEFGAWASTGEGRVASFKGRSPVVSRFSSRGPDIIDANRSLADVLKPDVLAPGHQIWGAWSPISAKLPMLTGHNFALLSGTSMAAPHVAGIAALIKQHNPSWTPSMIASAITTTSSKYDNLGDPMMAEGYEPHSLHRSTPFEYGAGIVNPSRAIDPGLVLSTDYVDFISFLCSLPNIDANTITTATGEPCKSPFDYPSNLNLPSVTISELKGSMYVRRTVMNVGNSTETYLGSVLAPNGTTVNLNPTWFTISPQGTLDLDIQINVVQPIKDFRFGEIVLTGSMDHIVRITLSVVPVSA 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04831 811 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Tsu04g04831 811 PRINTS Subtilisin serine protease family (S8) signature 592 608 IPR015500 -
Tsu04g04831 811 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Tsu04g04831 811 ProSitePatterns Serine proteases, subtilase family, histidine active site. 230 240 IPR022398 -
Tsu04g04831 811 ProSiteProfiles Serine proteases, subtilase domain profile. 128 667 - -
Tsu04g04831 811 CDD Peptidases_S8_3 120 629 IPR034197 -
Tsu04g04831 811 Gene3D Peptidase S8/S53 domain 150 680 IPR036852 GO:0004252|GO:0006508
Tsu04g04831 811 ProSitePatterns Serine proteases, subtilase family, serine active site. 593 603 IPR023828 -
Tsu04g04831 811 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 98 802 - -
Tsu04g04831 811 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 153 164 IPR023827 -
Tsu04g04831 811 CDD PA_subtilisin_like 366 508 - -
Tsu04g04831 811 Pfam Subtilase family 148 637 IPR000209 GO:0006508|GO:0008236
Tsu04g04831 811 Gene3D - 360 528 - -
Tsu04g04831 811 Gene3D - 684 808 - -
Tsu04g04831 811 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 98 802 IPR045051 -
Tsu04g04831 811 SUPERFAMILY Subtilisin-like 122 671 IPR036852 GO:0004252|GO:0006508
Tsu04g04831 811 Pfam Fibronectin type-III domain 712 806 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04831 Tsu-Chr4 55365958 55370957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04831 11 806 Subtilisin-like Serine Gene Family AT1G62340 57.457 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04831 - - gmx:100798915 1042.34