Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04825 ATGGAGATATCTCTTCCTTTTGTTCTGCTTGCCACTGTTGCTATTATGGCTATGCCATTGCCACTTTCATTTGGGGTAAAAGGAAACCAACTTTCATACAACTACTACAAGTATTCCTGTCCAAACTTGGAAAGTTTGGTTGAGAAAGAATTGATGAGCTTATTCTTGACAGATATTACTGCAACATCATCATTTCTCAGACTCATGTTTCATGACTGCCAAGTTCAGGGATGTGATGCCTCAATTTTGTTGAACACAAACTACATTACTCGAAACACCGAAATAACATCTTCGAGAAACTTCGGCATCAGACATAGAGAAACAATAGACAACATAAAATCGGTGTTAGAAGAAGAATGTCCAGGACAAGTGTCTTGTGCAGATATCATTGTATTAGCCGCTAAGGTATCAGTTGCCTTTTCTGGAGGACCTAGTATTGAGGTTCCACTTGGAAGAAAAGATTCAACAACTTCTAGTTCTAAACAAGCTGATGCTAAGCTTCCTTCACCAACAATATCTGTTGATGAATTTATATCCATGTTCAACTCTAAAGGAATGAGTATTCAAGAAGCTGTTTCCATTTTAGGTGCACATACATTAGGTGTTGGACACTGCTTAAACATTGTAGGCAGATTGTATAATCAACAGATAAGAGACAAAATGGATTGGAGGTTTAAAACCGCACTAAGACTAGCATGCCCAACAGAGATTCCATTGACAAACCTCACAGTTGTGCCTATTGACATGACCCCTACAATATTTGACAATCATTATTACAGAGACATTATGATGGGGAGAGGTTTGTTTGGTATTGACTCGGACATTTCTACAGATCCAAGAACTGCACCCTTTGTCATGAGGTTTGCTGTGGATCAGAACTACTTCTTTGACTCCTTCAAATCTGCATTTGTTAAGCTTTCTTCTTCCAATGTTCTCACAAATATGCAGGGTGAAGTAAGAAGGAAATGCAACCAGAGAAACTAA 984 0.3841 MEISLPFVLLATVAIMAMPLPLSFGVKGNQLSYNYYKYSCPNLESLVEKELMSLFLTDITATSSFLRLMFHDCQVQGCDASILLNTNYITRNTEITSSRNFGIRHRETIDNIKSVLEEECPGQVSCADIIVLAAKVSVAFSGGPSIEVPLGRKDSTTSSSKQADAKLPSPTISVDEFISMFNSKGMSIQEAVSILGAHTLGVGHCLNIVGRLYNQQIRDKMDWRFKTALRLACPTEIPLTNLTVVPIDMTPTIFDNHYYRDIMMGRGLFGIDSDISTDPRTAPFVMRFAVDQNYFFDSFKSAFVKLSSSNVLTNMQGEVRRKCNQRN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04825 327 Pfam Peroxidase 48 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 Gene3D Peroxidase, domain 2 168 306 - -
Tsu04g04825 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 CDD secretory_peroxidase 30 324 IPR033905 GO:0004601|GO:0042744
Tsu04g04825 327 ProSiteProfiles Plant heme peroxidase family profile. 30 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Tsu04g04825 327 PANTHER PEROXIDASE 25-RELATED 24 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04825 327 Gene3D - 34 327 - -
Tsu04g04825 327 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Tsu04g04825 327 PANTHER PEROXIDASE 24 325 - -
Tsu04g04825 327 SUPERFAMILY Heme-dependent peroxidases 30 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04825 Tsu-Chr4 55315832 55317352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04825 77 325 Peroxidase AT3G17070 52.362 3.65e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04825 K00430 - gmx:100806951 496.123