Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04799 ATGGTTAGGTTGGTTTATTTAAGTAGAGCAAGTAGCTCAGTGTACTTCACACTCTCTTCACTACCGAAAGCAATGTCTCCAAACAAAGCTTTCATCTTCTTGGCTCTCTTGTCCTTTTCACCACAACTCTTTCTGAGTCTCTCTTTTGCAGAAGAAGATAATGGCCTTCTCATGAATTACTACAAAGAATCATGCCCTCAAGCTGAAGAAATCATCAAAGAACAAGTCAAACTTCTCTACAAACGCCACAAGAACACTGCTTTCTCATGGCTCAGAAACATTTTCCATGACTGTGCTGTTCAGAGTTGTGATGCTTCTTTGTTGCTGACATCAACAAGAAGAAGCTTGTCTGAGCAAGAACATGACAGAAGCTTTGGTTTGAGGAATTTTAGGTACATTGATACCATCAAAGAAGCTGTTGAAAGAGAGTGTCCTGGAGTTGTTTCTTGTTCTGACATCCTTGTTCTTTCTGCTAGAGAAGGCATTGTTTCGCTAGGAGGACCTTATATTCCTTTGAAAACAGGAAGAAGGGATGGTAGAAAGAGCAGAGTGGATCTGTTGGAGGCTTACCTTCCTGACCACAATGAGTCCATTTCTGCTGTTCTTGACAAGTTTGGTGCCATGGGAATTGACACTCCTGGTGTTGTTGCTTTGCTTGGAGCACACAGTGTTGGTAGAACACATTGTACAAAATTGGTGCACCGTTTATACCCAGAAGTTGATCCAGCTTTGAACCCAGAACACATTCCACACATGCTAAAGAAGTGCCCTGATTCAATTCCTGACCCTAAGGCCGTGCAGTACGTTAGAAATGACCGTGGCACACCGATGATTCTTGATAACAACTACTACAGAAATATCTTGGACAACAAGGGTCTATTGATAGTGGATCATCAATTAGCACATGACAAGAGAACAAAGCCTTATGTAAAGAAAATGGCCAAGAGTCAAGAGTATTTCTTCAAGGAATTTTCAAAAGCTATTACATTGCTTTCTGAAAACAATCCTCTTACTGGCACAAAGGGTGAGATTAGAAAGCAATGCAGTGTTGCTAACAAGCAGCACCATGAAGAACCTTGA 1080 0.413 MVRLVYLSRASSSVYFTLSSLPKAMSPNKAFIFLALLSFSPQLFLSLSFAEEDNGLLMNYYKESCPQAEEIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLTSTRRSLSEQEHDRSFGLRNFRYIDTIKEAVERECPGVVSCSDILVLSAREGIVSLGGPYIPLKTGRRDGRKSRVDLLEAYLPDHNESISAVLDKFGAMGIDTPGVVALLGAHSVGRTHCTKLVHRLYPEVDPALNPEHIPHMLKKCPDSIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLAHDKRTKPYVKKMAKSQEYFFKEFSKAITLLSENNPLTGTKGEIRKQCSVANKQHHEEP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04799 359 PRINTS Haem peroxidase superfamily signature 148 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Haem peroxidase superfamily signature 214 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Haem peroxidase superfamily signature 87 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Haem peroxidase superfamily signature 166 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Haem peroxidase superfamily signature 272 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 Gene3D Peroxidase, domain 2 192 331 - -
Tsu04g04799 359 PRINTS Plant peroxidase signature 326 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Plant peroxidase signature 270 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Plant peroxidase signature 89 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Plant peroxidase signature 147 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Plant peroxidase signature 286 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Plant peroxidase signature 213 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Plant peroxidase signature 166 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Plant peroxidase signature 65 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PRINTS Plant peroxidase signature 128 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 ProSiteProfiles Plant heme peroxidase family profile. 55 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 Gene3D - 59 352 - -
Tsu04g04799 359 PANTHER PEROXIDASE 42 46 351 - -
Tsu04g04799 359 CDD secretory_peroxidase 55 350 IPR033905 GO:0004601|GO:0042744
Tsu04g04799 359 SUPERFAMILY Heme-dependent peroxidases 56 352 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 PANTHER PEROXIDASE 25-RELATED 46 351 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04799 359 Pfam Peroxidase 73 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04799 Tsu-Chr4 55143123 55145887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04799 29 355 Peroxidase AT4G21960 78.899 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04799 K00430 - gmx:547513 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04799 04 55143123 55145887 Tsu04g04799 04 55143123 55145887 ECH