Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04745 ATGGCTGAGCATCGAGTCACCGAACCTCTCCCAAAAGGAAATTCTTCGGAAACTAACGATCAACAAAAACCTCAAGAGACAAAGGAACGAGTCACTGAATCACCGCCTGCCACCGAGTCGCAGAGAAACGATTTACCTAGTTCTATAAAGCATAATTCAGAAACCCTAATTGCTTTTCCATCTTCGGTTTTACAGAATCAAAGTATTGTTGCAGATTCGCAAGGGAGCCCTAATACGATGAATTCGAGTGCCAAAGGTGAAAATAAGGAAACAGTTGGACCTCCTGAAAAGGAAATTACTGCAAGACAAGATGCCCAAACACCTCCAACTCAGACTGGAAATCAGCTTCAATTGACTGTGTTTTCACCTCCAAATTCTGTTACAAACTCTTTATCATCTGTTCCTAGTCCAACCACAGGAATAGAGAAAATGTCTACTCCAAATGTTAATATTATGCCTGCATCAGCATACAAAAAAAACCTTTCTGGTGGTAAAGCCTTATCTTCTGTTACTGTTCCAAGGACACCATCATCTGATGGATACAACTGGCGGAAATATGGTCAGAAGCAAGTTAAGAGTCCTACTACAAGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAGAAGTGAGCACAGTCATGATCCCCCACGGAAGATAAATTCCGTTAGGGAAAGTAAGCTTGCACCTTCTAATGAACCTAATGCAGAGAACAGTGTTTTAGCGAAGCCTCTCAATGTTCTGAAAGAATCTGACCCATCCACATCTTCCAAAGCTCAAGAAGAAGCACCTTGTGGTACTGACAAGAAACCACAAAACTCATCTAATATCAATGGTAATGGTAAAGTTATTTTGAAGGAGGAACATCTAGACGAGCCAGAGCCAAAACGAAGAAAGGAGAAAGACGACTTAATTCACTCAGATTCTCCTGTAAATCCTGGAAAGAAACCCAAGTATGTTGTACAAGCAGCAGGAGATGTGGGTATATCAGGCGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGTAATCCACATCCCAGAAACTACTATAGATGCACTTCGGCTGGATGTCCTGTCCGGAAGCACATTGAGACTGCTGTAGACAACTCAGATGCTGTAATCATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCTAAAAAACGACATGGCCCACCAAGTGCTCCTCTTGTGGCGGCTGCAGCACCTGTCTCCATGAATAATTTGCAGTTGGTTAAACTAGACTCGCCGCAAAACCAGAAAGTTTCTACTCAATGGTCAGTGGACAAAGAAGGAGAACTAACTGGGGAAGCCATGGACCTCGGAGGTGAGAAGGCAATAGAGTCAGCTAAAACCCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1470 0.4279 MAEHRVTEPLPKGNSSETNDQQKPQETKERVTESPPATESQRNDLPSSIKHNSETLIAFPSSVLQNQSIVADSQGSPNTMNSSAKGENKETVGPPEKEITARQDAQTPPTQTGNQLQLTVFSPPNSVTNSLSSVPSPTTGIEKMSTPNVNIMPASAYKKNLSGGKALSSVTVPRTPSSDGYNWRKYGQKQVKSPTTSSRSYYRCTQSNCCAKKIECWDHSGHVIETVYRSEHSHDPPRKINSVRESKLAPSNEPNAENSVLAKPLNVLKESDPSTSSKAQEEAPCGTDKKPQNSSNINGNGKVILKEEHLDEPEPKRRKEKDDLIHSDSPVNPGKKPKYVVQAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPVSMNNLQLVKLDSPQNQKVSTQWSVDKEGELTGEAMDLGGEKAIESAKTLLSIGFEIKPC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04745 489 ProSiteProfiles WRKY domain profile. 178 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g04745 489 MobiDBLite consensus disorder prediction 304 329 - -
Tsu04g04745 489 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 487 IPR044810 GO:0003700
Tsu04g04745 489 ProSiteProfiles WRKY domain profile. 345 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g04745 489 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 11 487 - -
Tsu04g04745 489 MobiDBLite consensus disorder prediction 103 146 - -
Tsu04g04745 489 Gene3D WRKY domain 164 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu04g04745 489 Gene3D WRKY domain 335 411 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu04g04745 489 SUPERFAMILY WRKY DNA-binding domain 172 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu04g04745 489 MobiDBLite consensus disorder prediction 68 146 - -
Tsu04g04745 489 MobiDBLite consensus disorder prediction 1 56 - -
Tsu04g04745 489 MobiDBLite consensus disorder prediction 269 301 - -
Tsu04g04745 489 Pfam WRKY DNA -binding domain 352 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g04745 489 Pfam WRKY DNA -binding domain 179 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g04745 489 SMART WRKY_cls 350 409 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g04745 489 SMART WRKY_cls 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g04745 489 MobiDBLite consensus disorder prediction 245 338 - -
Tsu04g04745 489 MobiDBLite consensus disorder prediction 68 88 - -
Tsu04g04745 489 MobiDBLite consensus disorder prediction 36 56 - -
Tsu04g04745 489 MobiDBLite consensus disorder prediction 245 259 - -
Tsu04g04745 489 SUPERFAMILY WRKY DNA-binding domain 346 410 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04745 Tsu-Chr4 54742352 54747003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04745 65 489 WRKY Transcription Factor Family AT4G30935 50.455 1.19e-125 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu04g04745 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04745 - - gmx:100127377 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04745 04 54742352 54747003 Tsu04g04745 04 54742352 54747003 ECH