Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04741 ATGGGGTTGCTTCCTCCACAAATGTTTTTCTCTCtaatcatgatgatgatgatgatgattaatcTTTGTAATGGCCAAGATTGTGGTGGAAGTTATATCCAAAAAACTCTAATTGTTGACCAACAACAAGGAAACGGAAATCATCAAACAATTGCCGATGCCATTAGGTCTATAGATACAAATAACAATAAGTGGTTTAAGATTCATATAAATCCTGGCACCTACTAtGAAATGATTGAAATTCCGAGTTCAAAGTCATGTGTTATTTTAGAAGGATCCGGTAGTGATACTACAAAAATTATTTCTGGACAAGTTGAAGTACGTCCAAATATATGGAACCCTACATTTAGTTCATATTCAAATAATGTGATTGTGAGTGACATTACATTCGAGAACTCGTATAATTTGGTAGATGAATCAAAACCTATCACACAAGCATTGGCAGCTGCTTTCTACGGGAACAAAACTGCAATCTTTAATTGTAGTTTTTTAGGTTATCAAGATACTTTGTTTGCAGCATTAGGAACACATTACTTTAAAGATTGTTATATTCAAGGTGAAACCGACTTTATTTTTGGTTCCGGCCAATCTTATTTTGAGAATTGTATAATGAACGCCACACAGAGGGGTCCATATCCAGGTTATGTGACAGCTCAACGTAGAGAATCACCAAATGATACAAATGGTTTTGTTTTTAGAAAAGGGTCTATTGTAGGAAATGGTAATGTGTATTTAGGAAGACCTTGGGGACCATATCCAAGGGTTATATTTTGGGAAACAGATTTTTCATCTGTGGTTTTACCTCAAGGATGGGATTTTGGAAAATTCAAAGATCAAACAAACCAGTTCACATTTGTAGAAGTGGATTGTACAGGACCAGGGGCCAATAATTGGGAACGTGTCTCTTGGATGAGAAAAAATCTTACTGATTCAGAACTAAATCAATATTCTTTATCAACTTTCATAAATGATGATGGATGGGTTTCCAATACACCCACTACATTCTTTTAA 1011 0.3412 MGLLPPQMFFSLIMMMMMMINLCNGQDCGGSYIQKTLIVDQQQGNGNHQTIADAIRSIDTNNNKWFKIHINPGTYYEMIEIPSSKSCVILEGSGSDTTKIISGQVEVRPNIWNPTFSSYSNNVIVSDITFENSYNLVDESKPITQALAAAFYGNKTAIFNCSFLGYQDTLFAALGTHYFKDCYIQGETDFIFGSGQSYFENCIMNATQRGPYPGYVTAQRRESPNDTNGFVFRKGSIVGNGNVYLGRPWGPYPRVIFWETDFSSVVLPQGWDFGKFKDQTNQFTFVEVDCTGPGANNWERVSWMRKNLTDSELNQYSLSTFINDDGWVSNTPTTFF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04741 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 334 - -
Tsu04g04741 336 PANTHER PECTINESTERASE 2 334 - -
Tsu04g04741 336 Pfam Pectinesterase 41 324 IPR000070 GO:0030599|GO:0042545
Tsu04g04741 336 Gene3D - 30 336 IPR012334 -
Tsu04g04741 336 SUPERFAMILY Pectin lyase-like 32 335 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04741 Tsu-Chr4 54717877 54719888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04741 9 279 Carbohydrate Esterase AT2G19150 39.855 3.49e-62 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04741 - - gmx:100803932 327.405