Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04700 ATGCTTTACAACAACAACTCTCTCATTCTCATTTTAACTCCTTTTGCATTTTTAGTAGCTACCGCTCCttttctcatttttctctctcaaacaACCAACCCAATAATGTTTACTATGCCTCCCCTCAAcgttcttcttctcttcttcttcttcctcttcctctctcAACACCCTCTTTCTTCCGCTGCTTCATTGCCTCGTAACCCTGAAGTGGAAGCTTTGATGAGTATAAAAGAAGGTTTAAATGATCCACATGGTGTATTAAGCAACTGGGATGAATTCTCTGTTGACCCTTGTAGTTGGCCCATGATTACTTGCTCTTCTGATTACCAAGTTATTGGCTTGGGTGCTCCTAGTCAAAATCTCTCTGGAACTTTGTCTTCAGCAATTGCAAATTTAACAAATCTTAAACAAGTGTTACTGCAGAATAACAACATCTCAGGCAAAATACCACCAGAACTTGGTAACCTTCCCAAGCTTCAGACTTTAGATCTTTCAAATAACAGATTCTCTGGGTTCATTCCACCTTCTCTCAGTCAATTGAATAGTCTTCAGTATCTGAGGCTGAACAACAATAGCTTGTCTGGACCCTTTCCTGCTTCACTGGCAAAAATCACACAACTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTTGTAGCCAGGTCATTCAATATTGTGGGGAACCCATTAATTTGTCTTAGCATCTCTATTGAAGGCTGTTCTGGATCAGTGACCCTTATGCCTGTACCTTTCTCTCAAGCCTCATCAGAAGGAAAACACAAATCCAAAAAACTGGCAATTGCTCTTGGGGTCAGCTTTAGTTTTGTTTCTCTCGTGATCCTGTTTTTGGGGCTCTTTTGGTATAGAAAGAAAAGACAGCATGGAGCTATCTTGTATATTGGTGATTATAAAGAAGAGGCAGTTGTTAGCTTAGGAAATCTCAAAAGTTTCGGTTTCAGAGAGCTCCAACATTCAACGGATAATTTCAGTTCCAAGAACATACTTGGTGCTGGGGGTTTTGGCAATGTTTATAGGGGGAAGCTTGGAGATGGCACGATGGTAGCGGTGAAAAGGCTGAAAGATGTAAACGGTAGTGCGGGTGAGTTACAGTTCCAAACAGAATTGGAGATGATCAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATTGGATATTGTGCTACTACTAATGAAAAGCTTCTGGTTTACCCTTATATGGCTAATGGCAGTGTGGCCTCCAGGCTTAGAGGAAAACCAGCTTTAGATTGGAATGCAAGAAAGAGGATAGCAATTGGAGCTGCACGGGGACTTTTGTATCTTCATGAACAATGTGATCCAAAGATAATACACAGAGATGTAAAGGCTGCCAATGTGCTTCTTGATGACGACTATGAGGCTATTGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGATCATGCTGATTCCCATGTCACCACTGCTGTCCGTGGTACTGTTGGGCACATTGCTCCAGAGTACCTCTCCACTGGCCAATCATCCGAGAAAACTGATGTGTATGGATTCGGCATTCTCTTGATAGAGCTTATAACTGGAATGACAGCTCTTGAGTTTGGGAAAACCTTGAATCAAAAAGGTGCTATGCTTGAGTGGGTTAGGAAAGTACAGCAAGAAAAGAAGGTTGAAGTGTTGGTGGACAAAGAACTAGGGTGCAACTATGATAGAATTGAGGTTGGGGAGATGCTGCAAGTAGCTTTACTTTGTACTCAATATTTGACAGCTCACCGTCCAAAAATGTCAGAAGTGGTTCGAATGCTCGAAGGAGATGGACTTGCTGAGAAGTGGGCATCAACACATAATTATGGTAACAACTGCTGGAGCCATAGTCAAAGCAACAGTAGTAGCAATAGCTCATCTCGTCCTACTTCTACTTCAAAACATGATGACAATAATGTTCATGATCGTTCTGGCATGTTTGGCATGAcaatggatgatgatgatgatcagtCTTTGGATTCCTATGCTATGGAACTTTCTGGTCCTagataa 2046 0.4008 MLYNNNSLILILTPFAFLVATAPFLIFLSQTTNPIMFTMPPLNVLLLFFFFLFLSQHPLSSAASLPRNPEVEALMSIKEGLNDPHGVLSNWDEFSVDPCSWPMITCSSDYQVIGLGAPSQNLSGTLSSAIANLTNLKQVLLQNNNISGKIPPELGNLPKLQTLDLSNNRFSGFIPPSLSQLNSLQYLRLNNNSLSGPFPASLAKITQLAFLDLSYNNLSGPLPKFVARSFNIVGNPLICLSISIEGCSGSVTLMPVPFSQASSEGKHKSKKLAIALGVSFSFVSLVILFLGLFWYRKKRQHGAILYIGDYKEEAVVSLGNLKSFGFRELQHSTDNFSSKNILGAGGFGNVYRGKLGDGTMVAVKRLKDVNGSAGELQFQTELEMISLAVHRNLLRLIGYCATTNEKLLVYPYMANGSVASRLRGKPALDWNARKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDDYEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVYGFGILLIELITGMTALEFGKTLNQKGAMLEWVRKVQQEKKVEVLVDKELGCNYDRIEVGEMLQVALLCTQYLTAHRPKMSEVVRMLEGDGLAEKWASTHNYGNNCWSHSQSNSSSNSSSRPTSTSKHDDNNVHDRSGMFGMTMDDDDDQSLDSYAMELSGPR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04700 681 MobiDBLite consensus disorder prediction 626 644 - -
Tsu04g04700 681 Pfam Leucine rich repeat N-terminal domain 68 107 IPR013210 -
Tsu04g04700 681 PRINTS Leucine-rich repeat signature 205 218 - -
Tsu04g04700 681 PRINTS Leucine-rich repeat signature 160 173 - -
Tsu04g04700 681 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 46 681 - -
Tsu04g04700 681 MobiDBLite consensus disorder prediction 645 661 - -
Tsu04g04700 681 Gene3D Transferase(Phosphotransferase) domain 1 413 623 - -
Tsu04g04700 681 MobiDBLite consensus disorder prediction 626 681 - -
Tsu04g04700 681 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Tsu04g04700 681 Gene3D Phosphorylase Kinase; domain 1 307 412 - -
Tsu04g04700 681 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 46 681 - -
Tsu04g04700 681 Gene3D Ribonuclease Inhibitor 67 249 IPR032675 -
Tsu04g04700 681 SMART serkin_6 336 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04700 681 Pfam Leucine rich repeat 158 218 IPR001611 GO:0005515
Tsu04g04700 681 ProSiteProfiles Protein kinase domain profile. 336 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04700 681 SUPERFAMILY Protein kinase-like (PK-like) 318 606 IPR011009 -
Tsu04g04700 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Tsu04g04700 681 SUPERFAMILY L domain-like 68 240 - -
Tsu04g04700 681 Pfam Protein tyrosine and serine/threonine kinase 339 605 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04700 Tsu-Chr4 54446423 54450537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04700 28 681 Receptor kinase-like Gene Family AT5G16000 61.934 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tsu04g04700 PK_Tyr_Ser-Thr 6.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04700 - - gmx:100775565 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04700 04 54446423 54450537 Tsu04g04700 04 54446423 54450537 ECH