Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04685 ATGGGTTGTTTAGATGGTTATCTTCCAGTAATTGTTATGATAGGTTTACAATTTCATTATGCATTACTTGCCATCTTTACAAGAGCTGCTCTAATGGATGGATTGACTCCCACTGTCTTTGTAGTTTATAGGCAAGGCATAGCCACTTTGTCATTGGCACCTATCATCATTTCCTCTAATAAAAGgaGACAATCTTTGAAGGCTTCATTAGGATTAAAGAGTTTCTCTCTGATGTTTATCACCTCTCTTATTGGGGTTACATTAAATCAGAATGCATATTTTAGTGGTTTATTCTATGCATCTTCTACAGCAGCAACTGCTATGAGTAATTTGATACCTGCATTAACTTTTGTATTTGCAGCAATTTTGGGaTATGAGAAAATTGATATTCGAAGTTTAAGAAACGCGGCCAAGATATTAGGGACAATTTGTTGTGTCAGTGGAGCCTTAACAATGGCATTTCTCAAAGGAAATAAGCTGTTACACATGGAGTACTTTCCTGATTCTAAACACCTCACTGCAAGTGGAGATGATACTTGGATTTTAGGTTGTCTATTGCTCTTAGCAAGTAGTGTTTTTTGGTCATGTTGGATGATCATGCAGGTACCAATTTCTTCATCATGTCCGGATCATATATTGTCGACTTTTTGGATGTGTCTTTTCGCTACAATACAGTCAGCTATATTTGCACTGCTCAAAGACCAGAATCTTCAATCATGGATTTTAAATTCACCTTTACAAATTTCATGCAGTTTATATGCAGGAATTGGAATTGCTGTTAGTTTCTTCATTCAATCTTGGTGCATCTCAGAAAGAGATCCTCTATACTGTGCAATGTTCAACCCTCTAGCAACTGTCATCACAGCTTTGGTATCAGCTACATTCCTACAAGAAGAGCTATACATTGGAAGTTTGGTAGGGGCTATTGGAGTGATCACTGGTTTGTATATTGTGTTATGGGGTAAAGCCAAAGACTTTGATGGGAGTAAACAAGAGCTACAACAATCAAACATAGTGGATGATGAAATAAGTAATAAGATAGATTTGGAAGAACCACTTCTAGCAGAGAAGTCAGAATATGTAACTGAGAGCAAGATGGAGCCCTAA 1107 0.3695 MGCLDGYLPVIVMIGLQFHYALLAIFTRAALMDGLTPTVFVVYRQGIATLSLAPIIISSNKRRQSLKASLGLKSFSLMFITSLIGVTLNQNAYFSGLFYASSTAATAMSNLIPALTFVFAAILGYEKIDIRSLRNAAKILGTICCVSGALTMAFLKGNKLLHMEYFPDSKHLTASGDDTWILGCLLLLASSVFWSCWMIMQVPISSSCPDHILSTFWMCLFATIQSAIFALLKDQNLQSWILNSPLQISCSLYAGIGIAVSFFIQSWCISERDPLYCAMFNPLATVITALVSATFLQEELYIGSLVGAIGVITGLYIVLWGKAKDFDGSKQELQQSNIVDDEISNKIDLEEPLLAEKSEYVTESKMEP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04685 368 PANTHER WAT1-RELATED PROTEIN 9 347 - -
Tsu04g04685 368 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Tsu04g04685 368 Pfam EamA-like transporter family 182 319 IPR000620 GO:0016020|GO:0016021
Tsu04g04685 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 323 - -
Tsu04g04685 368 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
Tsu04g04685 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04685 Tsu-Chr4 54350492 54353527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04685 1 358 Nodulin-like Gene Family AT4G30420 44.624 8.89e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04685 - - gmx:100817369 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04685 04 54350492 54353527 Tsu04g04685 04 54350492 54353527 ECH