Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04679 atGCGAAATTTGAGTTCACTCAAGAAAGAATTTCTTAGGAAATGGATAAAGGGTCTAAGAAAGTACAACTCTCAAAAGAAGAATATGAACTTGTTGGAGAGAAAAAAAGCTATAAAGCTCTCTGCAGATTTAGCCATGGCTTCCACCAAAGACAAAACTACCCTTTGGAGAAAAGCCCTATTTGCAAACACTTCAACAAAAATAGATGATGAACATGACATATCAACAACCTCATCATCACAAAAGAAGGTAATAAGAAAAAACTCGACGAATTCGTACCCTCTTTATAGAAAAAGGATAACTGGAAGGAGAACAATCTTGAGAAGAAATCGCACAAAGGAAAGAGTGGAGGCGAGTTTTATCGCAACGCGATTGGTTAAGAAGAGAACAAGGAGGCTGAAGAGTTTGTTACCAGGTGGAAAATTCATGGATGATGCTTGTTTGGTTGATGAAACCCTAGATTATATAGAATCTTTGAAAGCTCAAGTTGAAGTAATGAGGTGTCTTGTTACTTCCTCCGAGCTCTTCATTAATCCATCCTAA 543 0.372 MRNLSSLKKEFLRKWIKGLRKYNSQKKNMNLLERKKAIKLSADLAMASTKDKTTLWRKALFANTSTKIDDEHDISTTSSSQKKVIRKNSTNSYPLYRKRITGRRTILRRNRTKERVEASFIATRLVKKRTRRLKSLLPGGKFMDDACLVDETLDYIESLKAQVEVMRCLVTSSELFINPS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04679 180 CDD bHLH_AtIBH1_like 124 170 IPR044549 GO:0006355
Tsu04g04679 180 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 172 IPR044660 GO:0006355
Tsu04g04679 180 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 172 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04679 1 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 42.373 2.64e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04679 - - ccaj:109811886 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04679 04 54283830 54284952 Tsu04g04679 04 54283830 54284952 ECH