Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04664 ATGTCGCCGGATCTTGCAACGAGAGTTGTGACACGATGGTGTCTTGGTATTAACAAGATGAAGATGATTGGTGAAATTGTTCTCGGTGAATCTAATGATGGAGTGCCCTTCGATGGTCGTTTTCGTCTTGCATTGTCAATGCCTGTTAAAACCATGATGATGAAGGGTCACAAAGTCATTTTGACTATCAAGTCAACTCACAGCAATGAAGAAGGAGATTCACTTCCACATAATTCAACACTACAAATTAGTACTCTAGAGTTACTTTCTTGGACGAAGATTGTTTCTCAAGTAACCGTTGATAAAAAggttgtcaaaaaaagaaaaggattcgACTGTTGTTCAAATGACGGAGCTGTTGTAAAATTGAAACTAATTATTAAGCTGCAAGATGGCACTGAGAATGATGGTGAAGCAGAGTTGTTTGAATTCAAAACAAACGACGCAAAGCAAATGATTGATGAGCTTGATAGAGCTGTAAGCACCATGAAGAAAGGTGATGTAGCATTGTTGATTATTGAGCCTGAATATTCTTTTGGTTCATCGGAGTCTCGCCATGAATTAGATGTGGTTCCTCCTAATTTAACCTTGGATTATGATGTTGAACAAGTTTCAATTCTTGAGAACAAAGGGTCATGGAACATGATGAGCGTTGCAGAGAAATTACAAGTTTCACGTAAGAAGCATGAAAGATATCATCCACCTTTTTTGCAACCGGAACATGTTAAAATTGATAATTCCCGTTTATACGAGGTTGATTCTTCTGGTTCAAAGGTCTGGCCGTTAAAAAGGGATTGTATATTGACCGTTGATCCTAGAGATGAAAATTTGTTCGGGGATGAATTGAACTCGATTGATGAGAAATTTAGAAAATTGTGCAGAATTGAGAAGGAGAAGAATAAGATGCATATGCAAACTTTTATGGAGATATGTTCAACAAAATGA 945 0.364 MSPDLATRVVTRWCLGINKMKMIGEIVLGESNDGVPFDGRFRLALSMPVKTMMMKGHKVILTIKSTHSNEEGDSLPHNSTLQISTLELLSWTKIVSQVTVDKKVVKKRKGFDCCSNDGAVVKLKLIIKLQDGTENDGEAELFEFKTNDAKQMIDELDRAVSTMKKGDVALLIIEPEYSFGSSESRHELDVVPPNLTLDYDVEQVSILENKGSWNMMSVAEKLQVSRKKHERYHPPFLQPEHVKIDNSRLYEVDSSGSKVWPLKRDCILTVDPRDENLFGDELNSIDEKFRKLCRIEKEKNKMHMQTFMEICSTK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04664 314 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 116 202 IPR001179 GO:0003755
Tsu04g04664 314 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 118 207 IPR001179 GO:0003755
Tsu04g04664 314 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 39 109 - -
Tsu04g04664 314 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 101 232 - -
Tsu04g04664 314 SUPERFAMILY FKBP-like 102 223 - -
Tsu04g04664 314 Gene3D - 85 212 IPR046357 GO:0003755
Tsu04g04664 314 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 101 232 - -
Tsu04g04664 314 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 39 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04664 Tsu-Chr4 54124707 54126263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04664 27 236 Calmodulin-binding Proteins AT3G25230 49.130 5.47e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04664 K09571 - gmx:100794411 172.555