Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04653 ATGGTGTCTCCAAAAAGTATAGGAAAGTATAGAGTTAGCAAGACCATAGGAGAAGGTACATTCTCTAAGGTTAAGCTTGCTTTCAATATCAACAATGGTGAGAAGGTAGCAATCAAGGTCATTGAGAAACAAATGGTCTTGAAAAACAATCTTAGGTATCAGGTACAAAGTGAGATTAGAACAATGAAACTTCTAAATCATCCTAATATTGTTAGAATTCATGAGgTTATTggcacaaaaacaaaaatatacattGTGATGGAATATGTATCAGGAGGTCAACTATTGGACAAATTGTCTTATGTCAATAAGTTAGATGAATGTGAGGCAAGAAAACTATTCCAGCAACTTATTGACGCGGTTGACTATTGCCATAACAACGGAGTTTATCATCGTGATTTGAAGCCTGAAAATTTGCTTATTGACAGCAAGGGAAACCTAAAAGTGTCTGATTTTGGATTAAGTGCGTTGAAAAAGTCTGATGATGTTTTAAGCACAAGGTGTGGATCCCCATGCTACGTGGCTCCTGAGGTGCTGATGAACAAAGGGTATGATGGAGCAGCTGTTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAGTTACTTGCTGGTTTTCTACCATTTGATGACCAAAACTTGATGAGTTTATACCATAAGATATGCAGAGCAAAATATACATGCCCCCCATGGTTTACTATAAGTCAAAAGAAACTAATCGCCAAAATACTTGAACCGCGTTCTGTAAAGCGGATAACTATTTCGGATATTATTGAAAATGAGTGGTTTCAAATAGATTATCAGCCTGTTCGCGCGTGTGAATTTGACCCGATCATTAACTTGGATGACGATAATGCTTCTAGTGACTCAATTGAGGATAAAACTAAAAAGTCAACGATAACCAAGTCCTCGAGCTTCATTAATGCGTTTCAACTAATAGCCATGTTTCAGGACTTTGATCTATCGTCTCTTTTTGAAGAACAGGATCACAAGAAGCAGATAACAATGCTTGGATCCCAACACGCAATCAATGAAACAGTGGGAAAAATAGAAGCTGCTGCAACAGATGTGAGACTGTCAGTAGAGAAAATGAACAACTTTAAGATGAAAATGCGCCCGAAACCGTCAATGACTAGGTGTTCAAGATCATACATTGACCTATCAGCTGAGGTGATAGAAGTTGCTCCAACTCATTGTGTTATACAAATATCAAAGTCTGCAGGAGATCTAAGAATGTACAATGAATTTTGTGAAAGTTTATCAAGTCTGCTGAAAGAAAATTCTGATACGCCTTCACAAGGCCAAGACTCCGTGGATCAATGCGACACTGGCAGCATAGAAAATCAAGATGCTGAATGGTAG 1359 0.3753 MVSPKSIGKYRVSKTIGEGTFSKVKLAFNINNGEKVAIKVIEKQMVLKNNLRYQVQSEIRTMKLLNHPNIVRIHEVIGTKTKIYIVMEYVSGGQLLDKLSYVNKLDECEARKLFQQLIDAVDYCHNNGVYHRDLKPENLLIDSKGNLKVSDFGLSALKKSDDVLSTRCGSPCYVAPEVLMNKGYDGAAVDVWSCGVILFELLAGFLPFDDQNLMSLYHKICRAKYTCPPWFTISQKKLIAKILEPRSVKRITISDIIENEWFQIDYQPVRACEFDPIINLDDDNASSDSIEDKTKKSTITKSSSFINAFQLIAMFQDFDLSSLFEEQDHKKQITMLGSQHAINETVGKIEAAATDVRLSVEKMNNFKMKMRPKPSMTRCSRSYIDLSAEVIEVAPTHCVIQISKSAGDLRMYNEFCESLSSLLKENSDTPSQGQDSVDQCDTGSIENQDAEW 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04653 452 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04653 452 Gene3D Kinase associated domain 1, KA1 301 426 - -
Tsu04g04653 452 Pfam NAF domain 304 362 IPR004041 GO:0007165
Tsu04g04653 452 MobiDBLite consensus disorder prediction 424 452 - -
Tsu04g04653 452 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Tsu04g04653 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Tsu04g04653 452 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04653 452 PANTHER SERINE/THREONINE KINASE 6 428 - -
Tsu04g04653 452 CDD CIPK_C 307 424 - -
Tsu04g04653 452 Gene3D Transferase(Phosphotransferase) domain 1 90 276 - -
Tsu04g04653 452 SUPERFAMILY Protein kinase-like (PK-like) 7 263 IPR011009 -
Tsu04g04653 452 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04653 452 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Tsu04g04653 452 ProSitePatterns Protein kinases ATP-binding region signature. 16 48 IPR017441 GO:0005524
Tsu04g04653 452 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04653 Tsu-Chr4 53998658 54001807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04653 87 423 CBL-interacting serine-threonine protein kinases AT5G57630 63.127 6.01e-145 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu04g04653 Pkinase 1.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04653 - - mtr:MTR_4g128820 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04653 04 53998658 54001807 Tsu04g04653 04 53998658 54001807 ECH