Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04641 ATGCAGAGACCAACTACAGACGGAATTAATATGGGGAAAAGGACCCTGGAAGGTGGTGGTGAAGATGACCAGCCTGAACGAAAGAGGCCTGCTCTTGCTAGTGTAATTGTTGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTATTCTTCGTAGAGTTGTGAGTGAAGAAGTAGAGCGTGCTTTGGCAAAGTTAGGTCCTGCAAGAGTTGGTGGAAGGTCTTCCCCTAAAATGATTGAAGGTCCAGATGGCAGAAACTTGCGGCTTCAATTTAGGTCCCAACTGGCTCTTCCTCTATTCACAGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTTCTGGTTGATACCAACAGTGGAAATGTCGTAACATCTGGACCTGAATCCTGTATAAAACTTGATATTGTTGTACTCGAAGGCGATTTTAACAATGAGGATGATGAAGATTGGACCCAAGAAGAATTTGACAGCCATGTGGTGAAAGAACGTGAAGGAAAGAGACCTTTGCTGTTTGGGGACCTGCAAGTGACACTCAAGGAAGGAGTTGGAACATTGGGGGAACTGACATTTACAGACAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTGGCATGAAGGTTGCATCAGGTTTTGGCGAGTCTATACGCATCCGCGAAGCCAAGACAGTGGCTTTCACTGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCTCCTGCATTGACTGATGAGGTATGGAGATTAGAGAAAATAGGCAAGGATGGGTCATTTCACAAAAAGTTGACTATTGCAGGAATATACACAGTTGAAGACTTTCTTCGACTTGTGGTTAAGGATCAACAGAAATTGCGGAATATCCTAGGAAGTGGTATGTCAAACAAGATGTGGGAAGCTCTCTTAGACCATGCAAAGACATGTGTTCTAAGTGGGAAGCTCTATGTTTATTATCCGGAAGATACAAGAAATGTTGGTGTTATTTTTAACCACGTCTATGAGCTGCGTGGTCTTATAACAGGAGAGCAATTCTTTCCTGCTGATTCTCTCAGCGATAATCAGAAGGTTTACGTAGATTCATTGGTGAAGAAGGCATACGATAATTGGGAGCAGGTTATAGAGTACGATGGCAAATCACTTGTGGATGCTGAGCAAAATAACAACTCTGTTGAATCTGAAAATGAACTTCATGTCGATTCAATTGATTATGTTGGTGGTTTAGATCATCAACTGCAAATGCCATCCCTCCCCATGTCTGTTACTTCTGAACAGCAGATGAATTCAGGGATGCCAGTTGGAGGTTATAACAATAATATGGTGATGAGGTATCCAAACCAGGCATTGATTGGAAATTCCAGCTCTCGGAGTCAGTTCGAAGGCTCATTATATGTGTCTAATGACCAATTAATAAGCAATGCTCACCAATCCCAAAGCACTAGTAATGATCATAGCACAGTTGGGTTGGCTCTTGGTCCTCCTCAATCATCGACATCAGGTTTCCATGCTGGTAGCTCTTCCATTCAACCATCTCCCCCAAATCTTTTTGATGATTGGTCACACAACAGGGACAAGGGTGTTGATGACTTCTTTTCAGAGGATGAAATCCGTGTTAGAAGTAATGAAATACTAGAGAATGAAGACATGCAGCACTTGCTTCGCCTTTTCAGCATGGGAGGTCATTCTTCCATGAATCCCGAGGATGGTTATTCATTCCCATCATTCATGCCATCTCCTATGCCGAACTTTGACGAGGATCGCTCTCGTCCTGGCAGAGCTGTTGTGGGATGGTTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGATAGCAGCTGAGAAGCGGGCTCAGATAGAGGAGATAGAGGAATAG 1908 0.4355 MQRPTTDGINMGKRTLEGGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARVGGRSSPKMIEGPDGRNLRLQFRSQLALPLFTGGKVEGEQGAPIHVVLVDTNSGNVVTSGPESCIKLDIVVLEGDFNNEDDEDWTQEEFDSHVVKEREGKRPLLFGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGMKVASGFGESIRIREAKTVAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLTIAGIYTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLDHAKTCVLSGKLYVYYPEDTRNVGVIFNHVYELRGLITGEQFFPADSLSDNQKVYVDSLVKKAYDNWEQVIEYDGKSLVDAEQNNNSVESENELHVDSIDYVGGLDHQLQMPSLPMSVTSEQQMNSGMPVGGYNNNMVMRYPNQALIGNSSSRSQFEGSLYVSNDQLISNAHQSQSTSNDHSTVGLALGPPQSSTSGFHAGSSSIQPSPPNLFDDWSHNRDKGVDDFFSEDEIRVRSNEILENEDMQHLLRLFSMGGHSSMNPEDGYSFPSFMPSPMPNFDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEEIEE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04641 635 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
Tsu04g04641 635 MobiDBLite consensus disorder prediction 483 518 - -
Tsu04g04641 635 Pfam Calmodulin binding protein C-terminal domain 323 385 IPR046829 -
Tsu04g04641 635 PANTHER CALMODULIN-BINDING PROTEIN 60 B 8 633 - -
Tsu04g04641 635 MobiDBLite consensus disorder prediction 1 28 - -
Tsu04g04641 635 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Tsu04g04641 635 PANTHER OS02G0177800 PROTEIN 8 633 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04641 Tsu-Chr4 53905226 53910492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04641 1 630 Calmodulin-binding Proteins AT5G57580 65.781 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04641 - - cam:101488801 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04641 04 53905226 53910492 Tsu04g04641 04 53905226 53910492 ECH