Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04626 atgtcatcACCTTTTCCTACCTGTTTCCGCCCCTCTCCAACCAATGAAGACAGCCGTCATTCTCCACCACCTCCACTTCCGCCACATTCAACCAACCCTAACCTCACCGCCTATCTCTTCCAAATTGACATAGGCATAGTTTCTTTGACTTGGTCACGTTCCATTTTTGGTCGTTCTATTCATGTTCAACTTCATCATCACCCATCTGATTCTCCACCATCAAATCCTTCTCCGTCTTCCTTTCCTCTCCACATTGAGATTATAGAACACGACGAACTCaacttttctctcttcttctcgaTTCGGAGCTTCTCTGAACCAATCACAACTTCTTCTCAACCTTACTCTGCTGTGTTGAAGTCATGGATACTGATGAAGAGTGCTCAATTGTTCTTCAGTTATCTGAAAATGATCCTTTCTTTGATGAAAAGAAGAAATTACTACGATATCTTACTTCCGATTGCAAGGATCATACAGTTAAATGAGCTGGAACTATATTTTGCTGAAGATGATGCCTCAGTGGAGTTTTACAGCTCCAGGAATGAGTTGGAGGCTCTCAATTCAATTGTTTTGCTCATCGACAAATCGCTTTCTAGTTGTCAACATTCCCATACGAATATCCTGCAAGTGTTACGGCAAACAATTCTTGATTTAATTTCTGATTTTGGGGACCAAAATAATCTGAAGGGAGTACTTGAAAAGTACCACAGTTGTGAGAAAGAAGAGCACCTGATCAAGTGGGGTAAAAGCCATGGTGTAAAGACACAATTAAAGATAGCTTATGTTGAAGGAGCAGGCCGGGGAATGATAGCAGAGAAAGATCTAAAAGTTGGAGATATTGCTTTAGAAATTCCTGTGTCCATTATCATTTCCGAGGAGCTTGtgcttgaaactgatatgTATCGTGTCTTAAAAGAGGTTGATGGCATATCATCTGAGACAATATTGCTATTATGGAGTATGAAAGAGAAGTACAACTGtgattcaaaattcaaaagttactTTGACACACTTCCAGAAAAATTTAATACAGGATTGAGTTTTGGGATTGAAGCGATTACAATGTTAGATGGAACTTTGCTGTTTGAAGAAATAATGCAAGCAAGACAGCACCTGCATGCTCAGTATGATGAGTTGTTTCCTGCTCTGTGCAATGGTTTTCCTGATATATTTCCTCCAGAGCTGTACACGTGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTATTCCAATAGCATGAAGATAATGTTTTCAGATGGAGAACTGAGAACATGTTTGATCCCTCTTGCTGGTTTTCTTAATCATTCACTGTGCCCACATATTATGCACTATGGCAAAGTAGATCCTTCAACAAATTCATTGAAATTTTGTCTATCAAGACCATGCAGATCTGGAGAAGAATGCTGCTTAAGTTACGGGAACTTCTCCAGCTCTcattttattacattttatggTTTCTTATCTCAAGGAGATAACCCGTATGATGTCATTCCTTTAGATTTTGATAGTTCATATATTGATTCTAACGAGGATAAACCTGTGTCAAATTGGGCGACTCACATGGTGCGAGGTACTTGGCTCTCCAACAATCACAGCGTATTCTACTATGGCCTTCCCTCTCCATTATTGAATCATCTTCGGAGATCTCGAAGTCCAGTGCTGCAAACAAATACAGTCTTGCAAGGAAATTTGGAAAATGAGCTGGAAGTTCTTGGAGATCTTAAGGACATCTTTGATGACATGATGGACAATATGGGTGATATCAATCTTGATGACAGAGAAAACTACAATTGGGATGAAAAATTGGCTGCGGATTTTAAAAATCTACAAAGACGAATTGCTCATTCCATTTCAATTTCATGTCAAACTGGAATAAGCATGTTGAAGAATGAATTGCAGAAGTGTTTGGCTGAGGACATCCTAGGCTAA 1929 0.379 MSSPFPTCFRPSPTNEDSRHSPPPPLPPHSTNPNLTAYLFQIDIGIVSLTWSRSIFGRSIHVQLHHHPSDSPPSNPSPSSFPLHIEIIEHDELNFSLFFSIRSFSEPITTSSQPYSAVLKSWILMKSAQLFFSYLKMILSLMKRRNYYDILLPIARIIQLNELELYFAEDDASVEFYSSRNELEALNSIVLLIDKSLSSCQHSHTNILQVLRQTILDLISDFGDQNNLKGVLEKYHSCEKEEHLIKWGKSHGVKTQLKIAYVEGAGRGMIAEKDLKVGDIALEIPVSIIISEELVLETDMYRVLKEVDGISSETILLLWSMKEKYNCDSKFKSYFDTLPEKFNTGLSFGIEAITMLDGTLLFEEIMQARQHLHAQYDELFPALCNGFPDIFPPELYTWEKFLWACELWYSNSMKIMFSDGELRTCLIPLAGFLNHSLCPHIMHYGKVDPSTNSLKFCLSRPCRSGEECCLSYGNFSSSHFITFYGFLSQGDNPYDVIPLDFDSSYIDSNEDKPVSNWATHMVRGTWLSNNHSVFYYGLPSPLLNHLRRSRSPVLQTNTVLQGNLENELEVLGDLKDIFDDMMDNMGDINLDDRENYNWDEKLAADFKNLQRRIAHSISISCQTGISMLKNELQKCLAEDILG 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04626 642 Pfam SET domain 266 473 IPR001214 GO:0005515
Tsu04g04626 642 CDD SET_LSMT 257 487 - -
Tsu04g04626 642 PANTHER BNAA07G01600D PROTEIN 143 638 - -
Tsu04g04626 642 MobiDBLite consensus disorder prediction 1 16 - -
Tsu04g04626 642 ProSiteProfiles SET domain profile. 255 473 IPR001214 GO:0005515
Tsu04g04626 642 MobiDBLite consensus disorder prediction 1 28 - -
Tsu04g04626 642 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 143 638 - -
Tsu04g04626 642 Gene3D set domain protein methyltransferase, domain 1 187 486 - -
Tsu04g04626 642 SUPERFAMILY SET domain 240 494 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04626 Tsu-Chr4 53766072 53773460 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu04g04626 SET 1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04626 K19199 - gmx:100778605 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04626 04 53766072 53773460 Tsu04g04626 04 53766072 53773460 ECH