Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04596 atggaggcacaacaacaaaataaaagaagacGTGTTTACTCTATGGAACCAAATAAAATAGTGCAATCTATATTTGCTAGAAACTATTTAAGTCATTTAGTTCCAGCATTGATGAAGATAAAGGAAAATACTAGTTCTACAAAAGATCATAACAATATCAGCAAAAATGTTAAGTATGAAGTGGACATGGCAATGGTTTTGTCAGCACAAGGTTTTGCATGGAGTAATGGCCTTAAAGTGAAGCTTCAAAGGGAACATGTCAACAATGTAGCTACAACTAGTGCCATAATTGAGAGTGATATTAATAATGAAGATgaggagaagatgaagaacttgatAGGTTTGGTACCTGGTGGAGAAGAGATTTGTGATGAACAAGTTGTTAATGAATTAGAAAGTTATATAAAATGTTTGCAAATGCAGGTGAATGTTCTTCAGTGCTTGATTGCAGAGAcatgttga 462 0.29 MEAQQQNKRRRVYSMEPNKIVQSIFARNYLSHLVPALMKIKENTSSTKDHNNISKNVKYEVDMAMVLSAQGFAWSNGLKVKLQREHVNNVATTSAIIESDINNEDEEKMKNLIGLVPGGEEICDEQVVNELESYIKCLQMQVNVLQCLIAETC 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04596 153 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 91 IPR044660 GO:0006355
Tsu04g04596 153 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 102 151 IPR044660 GO:0006355
Tsu04g04596 153 PANTHER TRANSCRIPTION FACTOR BHLH146 102 151 - -
Tsu04g04596 153 PANTHER TRANSCRIPTION FACTOR BHLH146 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04596 Tsu-Chr4 53503306 53503932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04596 1 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 39.634 1.08e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04596 - - mtr:MTR_4g127700 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04596 04 53503306 53503932 Tsu07g02358 07 26949285 26950040 PCT