Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04593 ATGGAAGCTCCGAGCTTTGTTTTCTTGTCCTTGCTTCTTATCCTCACTGCTACAACAACCTCAGCTCAACTCACTCGCGGCTTCTATAACAATGTATGCCCCAATGTCGAACAATTGGTTCGTTCTGCCGTGAATCAGAAGTTTCAACAGACATTTGTGACTGCTCCTGCCACTCTTAGACTCTTCTTCCATGATTGCTTTGTCAGGGGTTGTGATGCTTCAGTTTTGATTCAATCTCCAAATAATAAGGCAGAGAAGGATCATCCTGATGATATATCATTAGCTGGTGACGGCTTTGACACGGTTGTTAAGGCCAAGGCAGCCGTTGATAGAGACCCTAATTGCCGAAACAAAGTCTCTTGTGCTGATATACTTGCCCTCGCTACTAGAGATGTCGTCAATTTGGCAGGGGGGCCATTTTATAATGTCGAATTGGGAAGGCGTGATGGAAGAATATCTACTTTGGCTGGTGTTCAACACAATCTTCCTGGCCCTAatttcaatttgaatcaacTCAATTCCATGTTTAGCCTCCATGGCCTCTCCCAAACAGATATGATTGCATTATCAGGTGCACATACAATTGGATTCTCTCACTGCGGACGTTTCTCAAATAGAATCTACAGATTCAGCCCAAGAACTAGAATTGATCCATCATTAAATTTACAATATGCTTTTCAGCTAAGGCAAATGTGTCCATTAAAAGTTGATCCTAGAATTGCCATTAACATGGATCCTGTCTCACCTCGAAAGTTTGACAATCAATACTTCAAGAATCTACAACAAGGAAAAGGACTCTTCACTTCTGATCAAGTATTGTTTACAGATTCAAGGTCAAAGTCCACAGTCAACTTATTTGCATCAAATGAACAAGCTTTTAACAGTGCTTTTATTGCTGCTATTACTAAGTTGGGAAGGGTTGGTGTTAAAACTGGTAATCAAGGTGAAATTAGGATTGATTGCACCAGGGCCAACTAG 978 0.407 MEAPSFVFLSLLLILTATTTSAQLTRGFYNNVCPNVEQLVRSAVNQKFQQTFVTAPATLRLFFHDCFVRGCDASVLIQSPNNKAEKDHPDDISLAGDGFDTVVKAKAAVDRDPNCRNKVSCADILALATRDVVNLAGGPFYNVELGRRDGRISTLAGVQHNLPGPNFNLNQLNSMFSLHGLSQTDMIALSGAHTIGFSHCGRFSNRIYRFSPRTRIDPSLNLQYAFQLRQMCPLKVDPRIAINMDPVSPRKFDNQYFKNLQQGKGLFTSDQVLFTDSRSKSTVNLFASNEQAFNSAFIAAITKLGRVGVKTGNQGEIRIDCTRAN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04593 325 Gene3D - 27 325 - -
Tsu04g04593 325 Pfam Peroxidase 40 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Tsu04g04593 325 ProSiteProfiles Plant heme peroxidase family profile. 23 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Tsu04g04593 325 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PANTHER - 7 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 SUPERFAMILY Heme-dependent peroxidases 23 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g04593 325 CDD secretory_peroxidase 23 323 IPR033905 GO:0004601|GO:0042744
Tsu04g04593 325 Gene3D Peroxidase, domain 2 163 304 - -
Tsu04g04593 325 PANTHER PEROXIDASE 16-RELATED 7 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04593 Tsu-Chr4 53492542 53494351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04593 5 325 Peroxidase AT2G18980 74.766 0.0 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04593 K00430 - gmx:100804620 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00553 05 4515047 4517803 Tsu04g04593 04 53492542 53494351 PCT
Tsu04g04593 04 53492542 53494351 Tsu07g02354 07 26889276 26891649 PCT