Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04591 ATGGAACCAACATGGTGTGGTCGATTACCATTATCCGAATGGGATCAAATTGGAATCATATCACATGTTCCAACAATTTACTTTTACCACCCCCCACAAAACTGGCTCACCCCATCTTCAAAAATCGCCACCACTTTGAAAACCTCATTAAGCAAAGTCCTAGTACCGTTTTATCCACTAGCCGGTCGTTTACAATGGAAAGAAAACGGTCGTTTTGATATCGAATGCAATGCATTGGGTGTTCAATTCATCGAAGCACAATCCTCGTTAAAATTATCTGAACTAGGTGACTTTTCACCTACTTCTGAATATTATCATGATCTTATCCCACATGTTGATTACACACTCCCAATTCAAGATATTCCTCTAGTTATGGTGCAACTCACGCATTTCAAATGTGGTGGTATTAGCATTAGTTTGTTAGTCTCACATGCTGTTGCTGATGGACAAAGTTCGTTGCATTTCTCTAGCGAGTGGGCCCGACTCGCGCGAGGCGAGCCTTTGGAAATGGCACCATTTCTTGATAGAAACGTGTTGCCATCGAAAAAATATTGCAATGACGTTGTTAATGAACAGGAATTTAATCAACAACCTCCATTGTTGTTAGGAAATTcggataattttgaaaaaaggaagaaaaaaacaacCGTTGCTATACTTAAAGTGAGTAAAACACAAGttgaaaagttgaaaaaaacaGCCAATGAGAGTTGGGGGAAACCTAGTAATGGTCGAGGTTATACGAGGTATGAAACGGTAACCGGTCATATTTGGAGAAGTGCATGTAAAGCTAGAGGGCATGTAAATGACCAACCAACCGGGCTAGGTGTTTGTGTTGATTTCAGGAGTCGTGTGGAGCCTAATTTACCAAAAGGTTATTTTGGGAATGCAACTTTGGATGTTGTGGCTACTAGTCTTGCAGGTGATTTAATGTCTAAGCCTTTAGGGTATGCTTCAAGTAGGATAAGGGAAGCTATTGAAAAAGTGAATGATGAGTATGTTAGGAAGTGGTTTGAGTATTATAAGAAACAAGAAGATTTTACTAAGTTTCAAGATCTTCGTGAGATGTTAGGGAGTGATGAAAAAGGGCCATTTCATGGTAATCCTAATTTAGGTGTGGTTAGTTGGCTAACATTGCCAATTTATGGACTTGATTTTGGGTGGGGGAAAGAGGTTTATATGGGACCAGGAACACATGATATGGATGGTGATTCTTTGCTTCTTCCTAgtcatgatgatgatggattgtTGGTTGCTATTTGTTTGCAAGAGgaAATTGCAAATGCACTAATATTTGGGCGGGCAATTGTTTGCTAG 1317 0.3789 MEPTWCGRLPLSEWDQIGIISHVPTIYFYHPPQNWLTPSSKIATTLKTSLSKVLVPFYPLAGRLQWKENGRFDIECNALGVQFIEAQSSLKLSELGDFSPTSEYYHDLIPHVDYTLPIQDIPLVMVQLTHFKCGGISISLLVSHAVADGQSSLHFSSEWARLARGEPLEMAPFLDRNVLPSKKYCNDVVNEQEFNQQPPLLLGNSDNFEKRKKKTTVAILKVSKTQVEKLKKTANESWGKPSNGRGYTRYETVTGHIWRSACKARGHVNDQPTGLGVCVDFRSRVEPNLPKGYFGNATLDVVATSLAGDLMSKPLGYASSRIREAIEKVNDEYVRKWFEYYKKQEDFTKFQDLREMLGSDEKGPFHGNPNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHDMDGDSLLLPSHDDDGLLVAICLQEEIANALIFGRAIVC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04591 438 Gene3D - 1 196 IPR023213 -
Tsu04g04591 438 Pfam Transferase family 2 425 - -
Tsu04g04591 438 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 2 426 - -
Tsu04g04591 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 426 - -
Tsu04g04591 438 Gene3D - 202 432 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04591 Tsu-Chr4 53478321 53481267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04591 22 425 Monolignol Biosynthesis Gene Families AT5G48930 39.803 1.86e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04591 K13065 - gmx:100777007 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04591 04 53478321 53481267 Tsu04g04591 04 53478321 53481267 ECH