Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g04510 | ATGTCTACACCGAGATCAGTTGCAGTTGCCGTCAGTGGCGGCTCCGGTGCCGCCAAAGGTAGCCGACGAGCTTTACAGTGGGCGATGGAGAATGTTGTTCCTCAAGCAGATAGACTCATCTTAGTTCACGTCATCCCTAGAATCACTTCAATTCCATCTCCAGCTGGAGGGTATATTCCCATTTCGGAAGCAGATGCCCATGCCTTTGCAGCTTATGTGCAGGAAGTAAAACAGAAGTCTGAAGAAATCTTTGTTTCCTTCAAAAAACTATGTGAATCAAACACGATAGAAACCTTTCTGCTAGAAGATGACAATCCAGCAAATGCACTTCTTAGCTTTATCTCAGAGTCTGGGGTTCAAATATTAGTGCTGGGTTCCGATGACTCAAATTTTATTACAAGGAAGCTAAAAGGACCTGGTATACCGACTACCATTCTTAGAGGTGCTCCCGACAGCTGTGATGTATATGTTGTAGATAGAGATAGAATTGTATCAAAGTTAGCTGATTCTTCCTCTTCACATTCTCATGAGGAAGGCCCAAGGTACATTGTGTCTAATCGCCTAAATAAATCAGACAATGGTGCTAGCATTGGTGGACAAATGTCTGGAATCAGTGCATCCTCAACAGaacttaaaattctaaaaaatttcaaatttctatCAATATCAGAGCATAGTTACATTGGTCTGCAAACCTCTAGTCGTAGGAGTTCTTTTGAAAATTCTACTATAAGTGAAGAAGCAAATCCAGACAACTATGGAGACTATGTTGATACCATCAGTCTCCACTCATTTGATTCCATTGCATCTGCACATCATGAACCGTTAGTCATGCAAGAAGCAGAACGGTTGCAACTGGAGTTGCAGAATACGATTGCCATGTACAAACAGGTTTGTGAAGAACTGGCTCATGCTCAAAGCAAGGCCCTTTTACTTTCTTCTGAATCTCTGGAAGAagctaaaataataaatgcttCCTTGAAAAGAGAGGAGACTTTGAGAAAGATTGCTGCTGAAGAGAAAGCAAAGTATTTAAAAGTCATGAAGGAACTCGAGGAGTCAAAAAGTATGTTCGCCAAAGAGTCATATGAAAGGCAAATGGCTGAACTTAATGTCCTTAGAGAATCCATTGAAAAACAGAGAATTGTCGACACATTGCTCTCAAATGACAGGAGATACAGAAAATATACCATGGATGAAATCAGGATCGCAACAAACAATTTATCTGAGGACTTGGTAATTGGTGAAGGAGGATATGGGAAAGTTTATAAGTGCAATCTTGATCACACCCCAGTAGCTATAAAGGTTCTGCATCAGGACACAATCAACAAGAAAGCGGAGTTTCTGAAAGAGGTTGAGATTCTTAGTCAATTACACCATCCAAATATGGTTTTGTTACTTGGAGCCTGTCCTGAAAATGGTTGCCTTGTCTATGAATACCTGGAAAATGGAAGCCTAGAAGACTATCTTCTCAACAGAAGTGGAAAACCACCACTTCCTTGGTTTTTTCGATTTCGTATAGTTTTTGAAATGGCTTGTGGTCTCTCATTCTTGCATAATTCAAAGCCAGAGCCTATTGTTCATCGAGATATAAAACCCGGCAACATCTTGTTAGACAGAAATTATGTTAGCAAAATTTCAGATGTTGGATTAGCTAAACTCATTTCCGACGCTGTACCTGACAATATCACAGAGTACAGAGAATCAGTGCTTGCTGGTACACTTCATTACATGGACCCGGAGTATCAAAGAACTGGCACTGTTCGACCAAAATCAGATGTATATGCTTTTGGAGTAATAATTCTTCAATTGATAACTGCTCGCCATGCACGCGGACTTATTATGGCTATTGAAGATGCAATTACAAAAGGATCCTTTCGTGATATTTTAGATAAATCAGCTGGAGATTGGCCACTGAATGAGACAATTGAATTGGCTGAAATTGGTCTTAAATGCACTGCCCTTAGATGCAGAGATAGACCAGAACTTGATACTGAAGTTCTTCCACTGCTCAAAAGACTTTCTGATGTGGCAAATGCTAGTGTCAAGAAAGGAAGAAATAGTATATCCACCCCAAGCCAGTATTATTGTCCAATCCTTCAGGAAATCATGGATGAGCCATATATCGCCGCTGATGGTTTCACTTACGAGTACAGAGCAATCAAAGCATGGCTCAGCAAACACAATGTGTCACCAGTAACAAAGCATAAACTCAAGCATTCAGAGTTGATTCCAAACCATACTTTACGTTCTGCCATTCAGGAGTGGAAGTCAGAAATGACCTTACTTGATTAA | 2295 | 0.3983 | MSTPRSVAVAVSGGSGAAKGSRRALQWAMENVVPQADRLILVHVIPRITSIPSPAGGYIPISEADAHAFAAYVQEVKQKSEEIFVSFKKLCESNTIETFLLEDDNPANALLSFISESGVQILVLGSDDSNFITRKLKGPGIPTTILRGAPDSCDVYVVDRDRIVSKLADSSSSHSHEEGPRYIVSNRLNKSDNGASIGGQMSGISASSTELKILKNFKFLSISEHSYIGLQTSSRRSSFENSTISEEANPDNYGDYVDTISLHSFDSIASAHHEPLVMQEAERLQLELQNTIAMYKQVCEELAHAQSKALLLSSESLEEAKIINASLKREETLRKIAAEEKAKYLKVMKELEESKSMFAKESYERQMAELNVLRESIEKQRIVDTLLSNDRRYRKYTMDEIRIATNNLSEDLVIGEGGYGKVYKCNLDHTPVAIKVLHQDTINKKAEFLKEVEILSQLHHPNMVLLLGACPENGCLVYEYLENGSLEDYLLNRSGKPPLPWFFRFRIVFEMACGLSFLHNSKPEPIVHRDIKPGNILLDRNYVSKISDVGLAKLISDAVPDNITEYRESVLAGTLHYMDPEYQRTGTVRPKSDVYAFGVIILQLITARHARGLIMAIEDAITKGSFRDILDKSAGDWPLNETIELAEIGLKCTALRCRDRPELDTEVLPLLKRLSDVANASVKKGRNSISTPSQYYCPILQEIMDEPYIAADGFTYEYRAIKAWLSKHNVSPVTKHKLKHSELIPNHTLRSAIQEWKSEMTLLD | 764 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g04510 | 764 | SMART | Ubox_2 | 694 | 756 | IPR003613 | GO:0004842|GO:0016567 | |
Tsu04g04510 | 764 | CDD | RING-Ubox_WDSUB1_like | 695 | 735 | - | - | |
Tsu04g04510 | 764 | Gene3D | Phosphorylase Kinase; domain 1 | 387 | 480 | - | - | |
Tsu04g04510 | 764 | ProSiteProfiles | Protein kinase domain profile. | 408 | 671 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu04g04510 | 764 | Pfam | Protein tyrosine and serine/threonine kinase | 413 | 664 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu04g04510 | 764 | Gene3D | Transferase(Phosphotransferase) domain 1 | 481 | 691 | - | - | |
Tsu04g04510 | 764 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 692 | 762 | IPR013083 | - | |
Tsu04g04510 | 764 | ProSiteProfiles | U-box domain profile. | 690 | 763 | IPR003613 | GO:0004842|GO:0016567 | |
Tsu04g04510 | 764 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 34 | 6 | 759 | - | - | |
Tsu04g04510 | 764 | ProSitePatterns | Protein kinases ATP-binding region signature. | 414 | 435 | IPR017441 | GO:0005524 | |
Tsu04g04510 | 764 | SMART | serkin_6 | 408 | 671 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu04g04510 | 764 | Coils | Coil | 763 | 764 | - | - | |
Tsu04g04510 | 764 | Coils | Coil | 278 | 301 | - | - | |
Tsu04g04510 | 764 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 526 | 538 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu04g04510 | 764 | SUPERFAMILY | Protein kinase-like (PK-like) | 391 | 663 | IPR011009 | - | |
Tsu04g04510 | 764 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 5 | 160 | - | - | |
Tsu04g04510 | 764 | SUPERFAMILY | RING/U-box | 689 | 759 | - | - | |
Tsu04g04510 | 764 | Pfam | Universal stress protein family | 20 | 149 | IPR006016 | - | |
Tsu04g04510 | 764 | Pfam | U-box domain | 692 | 759 | IPR003613 | GO:0004842|GO:0016567 | |
Tsu04g04510 | 764 | CDD | STK_N | 6 | 158 | - | - | |
Tsu04g04510 | 764 | Coils | Coil | 334 | 354 | - | - | |
Tsu04g04510 | 764 | Gene3D | HUPs | 4 | 165 | IPR014729 | - | |
Tsu04g04510 | 764 | Coils | Coil | 360 | 380 | - | - | |
Tsu04g04510 | 764 | PANTHER | OS02G0152300 PROTEIN | 6 | 759 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g04510 | Tsu-Chr4 | 52802732 | 52808294 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g04510 | 6 | 762 | Plant U-box Gene Family | AT5G57035 | 54.124 | 0.0 | 843 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Tsu04g04510 | PK_Tyr_Ser-Thr | 2.2e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g04510 | - | - | gmx:100805896 | 1212.59 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu04g04510 | 04 | 52802732 | 52808294 | Tsu04g04510 | 04 | 52802732 | 52808294 | ECH |