Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04475 ATGGCCTCTTCAACCTCAACTTTGTATCTTCTAATGTTATTGTTATCAGTAACAGTAATGTCCTTAGCGACCAAAAAGACTTACATAGTTCACATGAAACACAACAACCACAATGCATTATCCATGTACTCTTCCATCCTCCAAtcttctgattctgattctaattctgattctgattcacTATTATATACATATACTAACTCTTACAACGGCTTTGCTGTTTCCCTTGATAATGAACAAGCGCAAAAACTGCGTAGTTCTGATTCAGTTCTTGGTGTATACGAAGATACCCTGTACTCGCTGCACACAACCCGAACCCCAGAGTTTTTGGGTCTTCTTCAAATTCAGACCCATTCTCAGTATCTGCATCAACCATCATACGACGTCGTTATTGGTGTTCTTGACACTGGCGTATGGCCAGAATCACAGAGTTTCCATGATTCACAAATGCCCCAAATCCCAACACGATGGCGTGGAAAGTGTGAATCAACACCAGATTTCGATCCTTCACTCTGTAACAAGAAACTCATTGGAGCTCGAAGCTTCTCAAAAGGCTATCTAATGGGATCCACCGGAGGTGGAAGAAGAAAAGCTGCTGACACTATTTCACCTCGTGACAGAGATGGTCATGGTACTCACACTGCCACCACCGCCGCTGGCTCCGCCGTAGCCAACGCTACTCTTCTCGGTTACGCTACTGGAACCGCACGTGGTATGGCTCCTCAGGCACGAATCGCTGTTTACAAGGTCTGTTGGACAGACGGTTGCTTTGCTTCCGACATACTCGCCGGAATAGATCAAGCAATTCAAGACGGTGTTGATGTGTTATCGCTTTCCCTCGGTGGTTCATCTTCCACTCCTTACTACTTCGATACAGTCGCAATCGGAGCATTTTCGGCGGTGGAGAGAGGGATATTCGTTTCTTGTTCGGCGGGGAATACCGGACCTCGCAGTGGTTCCTTGTCTAATGTGGCACCGTGGCTCATGACGGTCGGAGCAGGGACGCTGGATCGGGATTTTCCGGCTTACGCTATGCTCGGAAACGGAAAACGTTACTCTGGCGTTTCACTTTACAGTGGAGAAGGAATGGGAAATGAACCGGTTGGTTTGGTTTATTTTAACGAACGGTTCAACTCATCAAGCAGCATATGTATGCCCGGTTCGCTTGACCCAGAAATCGTGCGCGGGAAAGTAGTTGTTTGTGATAGAGGTGTCAACTCACGTGTTGAGAAAGGTACGGTGGTGAGTGACGCCGGAGGAGTTGGAATGATTCTTTCTAACACGGCGTCGAGCGGTGAGGGATTGGTGGCTGACAGTCACTTGGTACCCGCCGTAGCAGTTGGAAAAATAGAGGGAGATGAGATAAAAGAGTATGCATCGTTGGATCGTAATCCAACGGCTGTCCTTAGTTTCGGTGGAACTGTTTTGAACGTGAAACCTTCGCCCGTGATAGCATCTTTCAGCTCTCGTGGCCCCAATGGTGTGACCCCACAGATTCTAAAACCGGATATTATTGGGCCTGGCGTAAACATCTTAGCGGGCTGGACTGGTGCTGTTGGGCCTTCTGGCTCACAAGACACTCGTAAAACCCAATTCAACATCATGTCtgGTACGTCAATGTCATGTCCACACATAAGTGGAGTAGCTGCATTATTGAAAGCGGTTCATCCGGATTGGAGTCCAAGTGCAATCAAATCAGCTCTCATGACAACAGCTTATACCCTTGACAACACCGAATCTCCCTTAAGAGATGCAATGGGAGAGGCCTTATCCACACCATGGGCTTATGGGTCTGGTCATGTCAACCCACAAAAGGCTCTATCACCTGGTCTTGTTTATGATGTTGATACTAACGATTACATTGCATTTTTGTGCTCCTTAAACTACACACTTGACCATGTGAAACTTATTGTCAAGCGTCCTAATGTTAATTGTTCTACTTATTTGTCTGACCCTGGTGATCTTAATTATCCATCATTTTCTGTTGTTTTTGAAAACAATAGTAGTGTTGTTCAATACAAGCGTACACTCAGTAACGTTGGGGAGTCCGGATCAGTCTATGAAGTGGTTGTGAGTGGGCCATCGACGGTTGGAATAACGGTGAGCCCTACCAAGCTTGTATTTGAACAAGTTGGAGAAAGGCAAACATACATGGTCAAGTTTGTTTCCAACAGAGATTATGTTGATGATTCGATTACGTCTGATTTTGGCAGTATTACGTGGAGCAATGAACGACACCAAGTTAGGAGCCCAATTGCTTTTACATGGACCAATTTATGA 2280 0.4522 MASSTSTLYLLMLLLSVTVMSLATKKTYIVHMKHNNHNALSMYSSILQSSDSDSNSDSDSLLYTYTNSYNGFAVSLDNEQAQKLRSSDSVLGVYEDTLYSLHTTRTPEFLGLLQIQTHSQYLHQPSYDVVIGVLDTGVWPESQSFHDSQMPQIPTRWRGKCESTPDFDPSLCNKKLIGARSFSKGYLMGSTGGGRRKAADTISPRDRDGHGTHTATTAAGSAVANATLLGYATGTARGMAPQARIAVYKVCWTDGCFASDILAGIDQAIQDGVDVLSLSLGGSSSTPYYFDTVAIGAFSAVERGIFVSCSAGNTGPRSGSLSNVAPWLMTVGAGTLDRDFPAYAMLGNGKRYSGVSLYSGEGMGNEPVGLVYFNERFNSSSSICMPGSLDPEIVRGKVVVCDRGVNSRVEKGTVVSDAGGVGMILSNTASSGEGLVADSHLVPAVAVGKIEGDEIKEYASLDRNPTAVLSFGGTVLNVKPSPVIASFSSRGPNGVTPQILKPDIIGPGVNILAGWTGAVGPSGSQDTRKTQFNIMSGTSMSCPHISGVAALLKAVHPDWSPSAIKSALMTTAYTLDNTESPLRDAMGEALSTPWAYGSGHVNPQKALSPGLVYDVDTNDYIAFLCSLNYTLDHVKLIVKRPNVNCSTYLSDPGDLNYPSFSVVFENNSSVVQYKRTLSNVGESGSVYEVVVSGPSTVGITVSPTKLVFEQVGERQTYMVKFVSNRDYVDDSITSDFGSITWSNERHQVRSPIAFTWTNL 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04475 759 SUPERFAMILY Subtilisin-like 101 611 IPR036852 GO:0004252|GO:0006508
Tsu04g04475 759 CDD PA_subtilisin_like 346 467 - -
Tsu04g04475 759 Gene3D - 624 756 - -
Tsu04g04475 759 Gene3D Peptidase S8/S53 domain 128 620 IPR036852 GO:0004252|GO:0006508
Tsu04g04475 759 MobiDBLite consensus disorder prediction 191 215 - -
Tsu04g04475 759 Pfam Subtilase family 128 579 IPR000209 GO:0006508|GO:0008236
Tsu04g04475 759 Gene3D - 337 476 - -
Tsu04g04475 759 ProSiteProfiles Serine proteases, subtilase domain profile. 107 607 - -
Tsu04g04475 759 PANTHER CUCUMISIN-RELATED 17 756 - -
Tsu04g04475 759 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Tsu04g04475 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 102 IPR037045 -
Tsu04g04475 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Tsu04g04475 759 CDD Peptidases_S8_3 99 573 IPR034197 -
Tsu04g04475 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 756 IPR045051 -
Tsu04g04475 759 Pfam PA domain 392 455 IPR003137 -
Tsu04g04475 759 Pfam Fibronectin type-III domain 654 753 IPR041469 -
Tsu04g04475 759 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Tsu04g04475 759 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Tsu04g04475 759 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Tsu04g04475 759 SUPERFAMILY Protease propeptides/inhibitors 26 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04475 Tsu-Chr4 52512739 52515552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04475 10 759 Subtilisin-like Serine Gene Family AT2G05920 64.683 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04475 - - gmx:100786523 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04475 04 52512739 52515552 Tsu04g04475 04 52512739 52515552 ECH
Tsu04g04475 04 52512739 52515552 Tsu08g02295 08 32118440 32121994 PCT