Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04468 ATGGCCGCTGTTCGCTTCCTTCTTCTCATCATCTTCCCTCTTCTCATCTCTCATTCTCTTTCTATTTCAGAAACTGAAGCACTTCTCAAACTTAAACAATCTTTCACAAACCCACAGTCTCTTCCTTCATGGGTACCTAATCAACATCCATGTGTTTCAAAATGGGCTGGTGTCATTTGTTTCAATAACATCATCGAAAGTCTTCATATCGTTAATTTAGGACTCTCTggaaaaattgatattgatgCTCTTGGACAGATTACATCTTTAAGAACTATTAGTTTTGTTAACAACTCTTTCACTGGTCCTATTCCTGAATTCAACAAAATTGGTGCTTTGAAAGCTATATATTTATCTGAAAACCAATTCTCGGGACCTATCCCTCcagattttttttctcatttagGTTCTTTGAAGAAAGCATGgcttaataataacaaattctCAGGAAATATACCTGAATCTTTAACAGGTGTCCGCTTCCTCAGCGAGTTACATCTCGAAAACAATGAATTCTCTGGTCCTGTTCCGGAATttaaacaagaaattaaatCGTTCGATATGTCTAATAACAAATTACAAGGTGCAATACCGGCTTCAATGTCGAGGTATGAAGCTAAAGCTTTTGCAGGAAATGTAGAGCTTTGTGGGAAGCCTCTTGACAAAGAATGTGACAATTCTTTGCCTTCCTATACAGCTCCTGATGGTGGTGGACAAGGTGGTTCTGGTTGGGCTGTAAAAGTTATTGGAATTCTCATTGTTGCTACCGTGCTGGCTGTGCTTTTCACATTGGTGAAATCGAAACATAATATTGACGATGATTTCAGTGTTGCGAGTAGAGAAaataatgatgatgttgttcAAGTTCATGTTCCTAGCGCTAACCATAGTAGATCAGAAGGTGGTGGTGGTAGTAGTAGCAAAAAGGAATCTAGGAGAGGTTCTTCAAAGAGTGGAGGAATGGGTGATCTTATTATGGTGAATGATGaaaagggtgtgtttggtttaCCTGATTTGATGAAAGCTGCTGCTGAGGTTTTGGGAAATGGTGGGTTAGGTTCTGCTTATAAAGCTGCTATGACTAATGGTTTATCTGTGGTTGTGAAGAGGATGAGAGAGATGAATAAAGTTAGCAGAGATATATTTGATGCTGAGATGAGACGCTTTGGGAGGCTTAGAAACCGTAATATTTTGACTCCTTTGGCTTATCATTACCGCAGGGAAGAGAAGTTGTTTGTTACTGAATATATGCCCAAAGGAAGCTTGTTATATGTCTTGCATGGTGATAGAGGAACGAGTCATGCTGAACTGAATTGGCCAACGCGTTTGAAGGTTGTGAAAGGAATTGCACGCGGATTAACATTTCTTTACACTGAATTCGCAGCCGATGATCTGCCACATGGAAACCTTAAATCAAGCAACATACTACTAACTGATACTTATGAGCCACTCCTAAGTGACTTTGCATTTCATCCACTAATCAATTCAAACTATGCAACACAAACAATGTTTGCATACAAAACTCCTGATTACACTGTCTACCAAAAAGTTTCACAAAAAACCGATGTTTATTGTCTTGGAATCATCATTCTTGAAATCATTACAGGGAAATTCCCTTCTCAATATCACAGTAATGGTAAAGGTGGTACTGATGTTGTTCAATGGGTTTTCACAGCAATATCCGAAAGAAGAGAAGCTGAATTGATTGATCCAGAGTTAGCAGGGAATAATACAGAATCAACTAATCAAATGTTACAACTTATACAAATTGGGGCTGCTTGCACAGAAAGTAACCCCGAACAACGACTTAACATGAAGGAAGCAATTAGGAGGATAGATGAATTACAAGTTTAA 1854 0.3679 MAAVRFLLLIIFPLLISHSLSISETEALLKLKQSFTNPQSLPSWVPNQHPCVSKWAGVICFNNIIESLHIVNLGLSGKIDIDALGQITSLRTISFVNNSFTGPIPEFNKIGALKAIYLSENQFSGPIPPDFFSHLGSLKKAWLNNNKFSGNIPESLTGVRFLSELHLENNEFSGPVPEFKQEIKSFDMSNNKLQGAIPASMSRYEAKAFAGNVELCGKPLDKECDNSLPSYTAPDGGGQGGSGWAVKVIGILIVATVLAVLFTLVKSKHNIDDDFSVASRENNDDVVQVHVPSANHSRSEGGGGSSSKKESRRGSSKSGGMGDLIMVNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKAAMTNGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNRNILTPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTSHAELNWPTRLKVVKGIARGLTFLYTEFAADDLPHGNLKSSNILLTDTYEPLLSDFAFHPLINSNYATQTMFAYKTPDYTVYQKVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVFTAISERREAELIDPELAGNNTESTNQMLQLIQIGAACTESNPEQRLNMKEAIRRIDELQV 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04468 617 Pfam Protein kinase domain 345 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04468 617 SUPERFAMILY L domain-like 21 203 - -
Tsu04g04468 617 Gene3D Transferase(Phosphotransferase) domain 1 418 617 - -
Tsu04g04468 617 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Tsu04g04468 617 Gene3D Phosphorylase Kinase; domain 1 347 417 - -
Tsu04g04468 617 MobiDBLite consensus disorder prediction 291 324 - -
Tsu04g04468 617 SUPERFAMILY Protein kinase-like (PK-like) 345 611 IPR011009 -
Tsu04g04468 617 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04468 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 617 - -
Tsu04g04468 617 Gene3D Ribonuclease Inhibitor 183 221 IPR032675 -
Tsu04g04468 617 PANTHER LRR RECEPTOR-LIKE KINASE 4 617 - -
Tsu04g04468 617 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04468 Tsu-Chr4 52467940 52470330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04468 1 617 Receptor kinase-like Gene Family AT3G42880 49.610 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu04g04468 Pkinase 3.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04468 - - gmx:100788667 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04468 04 52467940 52470330 Tsu04g04468 04 52467940 52470330 ECH
Tsu04g04468 04 52467940 52470330 Tsu08g02326 08 33142267 33144722 PCT