Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04459 ATGCTCTTATTCATTTCTCCACCGTTTCTTCCCTTCTCAACCGCCGCAAAAACACCGCAAGATCTCCTCCGTTCATCATGTGCACAAGCAAGATACCCAACTCTCTGCGTCCAAACACTCACCAACCAAGTAACTCTCACAACAAAGCCATTAGACCTAGCTCAAGCCGCCGTAAAAGCCAGTCTCACTCGCACTCTCACTCTTTCCGTTTACCTCAAAAACACCCTAAAGTCACAGGTGAAACCGGCAGTGGAGTCCACCACAAGCAACAGAAAACGAGTTGCCCTAAATGACTGTGTTGCTCAGATTACTGACTCAGTTTCTGAGTTAAACCAAACGTTAAACGAGTTAAAGCATCTTCATATGGGAACTTTTGAGTGGCAAATAAGTAATGCTCAAACATGGGCTAGTACTGCTATAACAAATGGTAATTTATGTGTTAATGGTTTGAATAGGAAAGGTGCTGAAGAGAAGGTGAAGATGGAAGTGAAACGTAGGGTTAAAGATGTTTCTATGTTTACTAGTAATGCTCTGTACTTTATCAGTCGACTTGGTGAAAGTAGGAATCCAAAACCTCACTCAAATTCCAAGAACTGA 597 0.4238 MLLFISPPFLPFSTAAKTPQDLLRSSCAQARYPTLCVQTLTNQVTLTTKPLDLAQAAVKASLTRTLTLSVYLKNTLKSQVKPAVESTTSNRKRVALNDCVAQITDSVSELNQTLNELKHLHMGTFEWQISNAQTWASTAITNGNLCVNGLNRKGAEEKVKMEVKRRVKDVSMFTSNALYFISRLGESRNPKPHSNSKN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04459 198 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 193 - -
Tsu04g04459 198 SMART PMEI_2 18 180 IPR006501 GO:0004857
Tsu04g04459 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 18 185 IPR035513 -
Tsu04g04459 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 183 IPR006501 GO:0004857
Tsu04g04459 198 Coils Coil 100 120 - -
Tsu04g04459 198 Pfam Plant invertase/pectin methylesterase inhibitor 22 178 IPR006501 GO:0004857
Tsu04g04459 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 20 184 IPR035513 -
Tsu04g04459 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 1 193 - -
Tsu04g04459 198 CDD PMEI-like_3 25 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04459 Tsu-Chr4 52379745 52380341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04459 22 184 Carbohydrate Esterase AT3G14310 29.697 1.26e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04459 - - mtr:MTR_4g124855 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04459 04 52379745 52380341 Tsu04g04459 04 52379745 52380341 ECH