Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04444 ATGGCTTCTTCAGACAATTTTCAATCTTCTCACTCTCCTCACTCTCCTTCTCTCTCTGGTGAAACAATTCCAGCTCCTTCTAATCTCTGTATGCAGAAATTTCGGCTTTATGAAACTCGATCGAACTTTTACATGATAGGAAGAGACAAGAGCAGGACATACTGGAGGGTACTAAAGATTGACCGTCTAGATCCGTCTGAGCTAAATGTGCTTGAAGATTCCACCACGTATACAGAAAGAGAATGTTCTGATCTTTTGCGGCGGATACATGAAGGGAACAAGTCGACTGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTACTTATCACGAAAAGGAGGAAAATTGGTTCGATCTGCGGTCATGTAGTTTATGCTATCTCAAAGACTGAGATGATTCCATTGCCGAATTCTTCTGTTCGGTCTAATATCATCAATTCGAAAAACGAAAACAGgTACAAGAAGCTTCTATGCACAGTTGACCTTACGAAGGACTTCTTTTTCAGCTACTCATACCACATCATGCGCAGTCTTCAAAGGAACATGTCCGACACTGAGACAGGCCATGTCCTTTACGAGACCATGTTTGTCTGGAATGAATACTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTAGTGTATGGCTTCTTTAAACAGGACACACTTGAGATATCTGGACGGGAGTTCATACTGACGCTCATTGCGAGAAGATCACGCCATTATGCTGGCACTAGGTATTTGCGACGAGGTGTTAATGAGAAGGGCAGAGTAGCAAATGATGTTGAGACAGAACAAATAGTCTTTGAGGATGTTCCAGAAGGTCTTCCCATCCCGATTAGCTCTGTCATTCAGAATCGTGGCTCGATCCCGCTATTCTGGTCACAGGAAACTTCACGTCTAAATATTAAACCAGATATTATAGTGTCAAAGAAGGACCAGAATTATCAAGCTACTAGACTCCACTTTGAAAATCTTGTAAAAAGATACGGAAATCCcattataattttgaatttaataaaGACCCAGGAGAAGAAGCCTCGTGAGGCCATTCTTCGTCAAGAGTTTGCTAATGCTATAGAGTTCATCAACAAAGATTTGTCTGAGGACAACAGGCTTAGGTTCCTTCACTGGGATCTACACAGACATTTTCATAgcAAAGCTACAAATGTATTGCTGCTTCTAGGCAAAGTGGCTGCATATGCGTTGGCGTTAACAGGTTTTTTCTATTGCCAAGCGTCGTCAACCTTGAGACCTGAAGACTGTCTAAAATGGCCGCCTACAGACGATGTTGTTAAGGGAAGCTTTTCATTTACTGTACACACTGATTATGATAACGAGGATGCTAATGATTTAGAGAGGAAACCAAGTGATGGAATTAATATTTCCGATGAAAATCATTCTGCCAAATCACCCAGGTTGCAAAAGGGCGTGCTCAGGACAAACTGCATAGACTGCTTGGATCGCACAAATGTTGCACAATTTGCGTATGGGTTGGCTGCTATTGGCCACCAGCTTCACTCTCTGGGAATTATTCAGCACCCAAAAATTGATCTTGATGACCCTGTAGCTAATGATTTGATGCAGTTTTATGAGCGGATGGGTGACACACTTGCACATCAATATGGTGGATCTGCTGCACACAACAAGATATTCTCTGCGAGGAGGGGCCAATGGAAAGCTGCAACACAGTCTCAAGAGTTTTTTAGAACTCTTCAGCGCTATTACAGCAATGCTTGGATGGATGCTGAGAAACAAGATGCAATCAATGTATTCCTGGGGCATTTTCAGCCACAACAGGGTATGCCTGCTCTATGGGAGTTGGGTTCAGATCAGCACTACGATACGGGGAGGCTCGGTGACGATGACACAAGgtcATTTATGAAAAGATCTTTCTCAGATGGAAACATTCTTCGTGATAGTTCTACACCCATGTCGGCTCCAAATGCCAAGAATGAAAAATCCTCTAACCCAGGTTTACCAGACCGATCAGGAGAAGGGAGCAAGGCCTTCTGTGAGTCATCACCCGAAATATCTACTACTGAGACTGAGAGTGACATTTCGTTTTCAAGGTTTGTACCCTTTATTAATGTGAACTTAAATGTGTAA 2166 0.4206 MASSDNFQSSHSPHSPSLSGETIPAPSNLCMQKFRLYETRSNFYMIGRDKSRTYWRVLKIDRLDPSELNVLEDSTTYTERECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRKIGSICGHVVYAISKTEMIPLPNSSVRSNIINSKNENRYKKLLCTVDLTKDFFFSYSYHIMRSLQRNMSDTETGHVLYETMFVWNEYLTRGIRNHLQNTIWTVALVYGFFKQDTLEISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVPEGLPIPISSVIQNRGSIPLFWSQETSRLNIKPDIIVSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTQEKKPREAILRQEFANAIEFINKDLSEDNRLRFLHWDLHRHFHSKATNVLLLLGKVAAYALALTGFFYCQASSTLRPEDCLKWPPTDDVVKGSFSFTVHTDYDNEDANDLERKPSDGINISDENHSAKSPRLQKGVLRTNCIDCLDRTNVAQFAYGLAAIGHQLHSLGIIQHPKIDLDDPVANDLMQFYERMGDTLAHQYGGSAAHNKIFSARRGQWKAATQSQEFFRTLQRYYSNAWMDAEKQDAINVFLGHFQPQQGMPALWELGSDQHYDTGRLGDDDTRSFMKRSFSDGNILRDSSTPMSAPNAKNEKSSNPGLPDRSGEGSKAFCESSPEISTTETESDISFSRFVPFINVNLNV 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04444 721 MobiDBLite consensus disorder prediction 1 24 - -
Tsu04g04444 721 MobiDBLite consensus disorder prediction 652 702 - -
Tsu04g04444 721 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 24 716 IPR043573 GO:0043813|GO:0046856
Tsu04g04444 721 MobiDBLite consensus disorder prediction 654 681 - -
Tsu04g04444 721 MobiDBLite consensus disorder prediction 466 480 - -
Tsu04g04444 721 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 24 716 - -
Tsu04g04444 721 Pfam SacI homology domain 106 402 IPR002013 GO:0016791
Tsu04g04444 721 ProSiteProfiles Sac phosphatase domain profile. 170 563 IPR002013 GO:0016791
Tsu04g04444 721 MobiDBLite consensus disorder prediction 466 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04444 Tsu-Chr4 52220312 52229576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04444 31 713 Acyl Lipid Metabolism Gene Families AT3G43220 65.154 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04444 K22913 - gmx:100810079 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04444 04 52220312 52229576 Tsu07g00756 07 6249694 6260611 ECH
Tsu04g04444 04 52220312 52229576 Tsu04g04444 04 52220312 52229576 ECH