Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04434 ATGCTCTCAATTTCCCTAAGAGAATTGAATCGCAGAATCACCGAGAAGAGAATCGCTGATCGTTCTTCATCGAATCATCGATCACTCTTCAAGGCCTTCAGGCGTGCAGGGTGGCTTCCAAAATACCAGTTACCTATTACAGTTAACCTTTTTAATTCAAGACGCAAACAAGAGCTGTGCTTTTTCCCTCAAAATTTTGTATCACAAATCACTACACCAATCTTCTTTGCAAATTCGGAAATCGACTCATGGCAGATTAAGCACATTTTGGCACCAAATGCTGCTGATTGGCATGATTGCAAGCCAGATATAAAGAAATGCACTCCTGTTTACTCAGGTAGCTACTTGCATATGTGA 357 0.409 MLSISLRELNRRITEKRIADRSSSNHRSLFKAFRRAGWLPKYQLPITVNLFNSRRKQELCFFPQNFVSQITTPIFFANSEIDSWQIKHILAPNAADWHDCKPDIKKCTPVYSGSYLHM 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04434 118 Pfam Pectinacetylesterase 53 109 IPR004963 GO:0016787
Tsu04g04434 118 PANTHER PECTIN ACETYLESTERASE 52 109 - -
Tsu04g04434 118 PANTHER NOTUM-RELATED 52 109 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04434 Tsu-Chr4 52113798 52115742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04434 44 108 Carbohydrate Esterase AT4G19410 49.275 1.01e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04434 K19882 - gmx:100781246 85.1149