Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04420 ATGGCGACCGCCAATGTGACATATCCTCCGCCAATGAAGGCAGTGTCTAATGGGGCCTTCCAACATGAAAATCCGCTCGATTTTGCACTTCCTCTTTTGATCGTCCAGATATGTGTAGTTGTTACCTTCACTAGAGTTATTGCATTCCTTTGCAAACCTCTTAGACAACCTCGAGTCATTGCAGAAATCATCGGAGGAATACTTCTAGGACCATCTGCAATAGGACGAAGCGAGAAATTCCTAAACACAATTTTTCCAAAGAAAAGCTTAACAGTCCTAGACACACTAGCCAACATTGGTCTTTTGTTCTTCTTATTCCTAGTTGGGCTTGAACTCGACATGCGATCAATCCAAAGAACTGGTAAAAAAGCCTTAGCAATTGCCCTTTGTGGAATCACAGTCCCATTTCTTCTTGGAATTGGAACATCCGTTGTTCTTAGAGCCACAATCTCCAAAGGAGCAGAACCTGTCCCTTTTCTTGTCTTCATGGGGGTTGCTCTATCAATTACTGCATTTCCTGTCCTCGCTCGAATTCTAGCTGAGCTCAAACTCCTCACCACAGATGTCGGTCGTATAGCTATGTCAGCTGCTGCTGTTAATGATGTTGCAGCTTGGATACTTCTTGCTCTTGCTATAGCCTTATCCGGAGATGATACGTCACCTTTGATTTCTCTTTGGGTTATGCTCTCCGGTGCTGCTTTTATTCTCTTTGCTGTTTTCGCTATAAGACCGGTACTTGCATACATGGCTAAGCGTTCCCCCGAGGGTGAACCTGTAAGAGAGCTTTACATTTGTATCACACTCACAATGGTTTTGGCATGTAGTTTTGTTACTGATACTATTGGAATTCATGCACTATTTGGTGCTTTTGTTGTTGGTATAATTATGCCTAAAGATGGTCCTTTTGCCGGTGTTTTGATcgagaagattgaagatcttgttTCTGGTCTCTTTTTGCCACTCTATTTTGCTTCTAGTGGTTTGAAGACAAATGTGGCTACTATTAAGGGAGGGCTTTCTTGGGCACTATTAGCATTAGTTATATTCAATGCTTGCTTTGGAAAGATTATTGGTACTGTTGCAGTATCAATGCTATGCAAGATGCCTTTTAGAGAAGCCCTTGCACTTGGGTTTATCATGAACACCAAGGGATTGGTTGAGCTCATTGTTCTCAATATCGGAAAGGATCGCAAGGTGCTAAATGACCAATCATTTGCAATTTGTGTTCTTATGGCATTATTCACAACATTCATCACCACACCAATAGTGATGGCAGTATACAAACCAGCTAGAAGAGGAGCACCTTACAAGCACAAAACAATCCAACGTAAAGATAACGATTCAGAGCTACGAGTCTTGGCATGTTTCCACAGCACACGCAACATCCCTACACTAATCAACCTTGTAGAATCATCTCGAGGAACACGAAAGCGAGGAAAACTCTGTATCTATGCAATGCATTTGATGGAACTCTCAGAAAGATCTTCAGCTATCACTATGGTTCACAAGGCACGTAACAATGGCATGCCATTTTGGAACACGAAACAAAATGATGAAGATCGAATGGTAATTGCATTCCAAACCTATGGAAAATTGAGTAGTGTCAATGTTCGTCCCATGACAGCTATTTCGGCTCTCAACAACATCCATGAAGATATTTGTACTAGTGCTCATCAAAAGCGCGCTGCTATAATACTCCTTCCATTCCATAAACATCAACGTATGGACGGAACAATGGAGTCATTAGGACATTCATTCCATCTAATCAACGAGCTTGTGTTAAGTCATGCACCTTGTTCAGTTGGAATTTTGGTTGATCGCGGTCTTGGAGGAACAAGCCAAGTACAAGCTAGTGATGTTTCATTTAATGTTGTTGTAGTCTATTTTGGAGGGCGCGATGATAATGAAGCACTTGCTTATGGTTTGAGAATAGCAGAACATCCTGGGATTCTGCTAACTGTTGTTAAATTTGTTCCTCCACCCGGTATGACATTATCTTTTGGTGCTAAATTGGTTGGTGTTGCATCAGATAAGAACATAAAAGTAAtgattgatgatattgatggtaGTAGCCATGGTGGTAACCAAGATGAACAATTGTGGACTGAGTTTCATAATGTAAagaatatgaatgaagaatcaATTAAGTATGAGGAAAAGTTGGTTGAAAGTAAAAGTGATATTGAAGCAGCATTGAAAGAATTGAGTAGAAGCAATTTGATATTGGTTGGTAGAATGCCATCAGTTGCACCTTTGGTTGGTAAAAGTGATTCTCCTGAGCTTGGACCTGTTGGAAGTTATATGGCTTCTTCTACTTTCTCCAATTCTGCTTCAATTTTGGTCATTCAACAATATAATTCTTCATCTGATGTTCATCCTTTGGTTATGGAAGAATTTGATTGTCCTGAAATACCAGATACACCAaggaataattaa 2436 0.3949 MATANVTYPPPMKAVSNGAFQHENPLDFALPLLIVQICVVVTFTRVIAFLCKPLRQPRVIAEIIGGILLGPSAIGRSEKFLNTIFPKKSLTVLDTLANIGLLFFLFLVGLELDMRSIQRTGKKALAIALCGITVPFLLGIGTSVVLRATISKGAEPVPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGDDTSPLISLWVMLSGAAFILFAVFAIRPVLAYMAKRSPEGEPVRELYICITLTMVLACSFVTDTIGIHALFGAFVVGIIMPKDGPFAGVLIEKIEDLVSGLFLPLYFASSGLKTNVATIKGGLSWALLALVIFNACFGKIIGTVAVSMLCKMPFREALALGFIMNTKGLVELIVLNIGKDRKVLNDQSFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRKDNDSELRVLACFHSTRNIPTLINLVESSRGTRKRGKLCIYAMHLMELSERSSAITMVHKARNNGMPFWNTKQNDEDRMVIAFQTYGKLSSVNVRPMTAISALNNIHEDICTSAHQKRAAIILLPFHKHQRMDGTMESLGHSFHLINELVLSHAPCSVGILVDRGLGGTSQVQASDVSFNVVVVYFGGRDDNEALAYGLRIAEHPGILLTVVKFVPPPGMTLSFGAKLVGVASDKNIKVMIDDIDGSSHGGNQDEQLWTEFHNVKNMNEESIKYEEKLVESKSDIEAALKELSRSNLILVGRMPSVAPLVGKSDSPELGPVGSYMASSTFSNSASILVIQQYNSSSDVHPLVMEEFDCPEIPDTPRNN 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04420 811 Gene3D - 32 434 IPR038770 -
Tsu04g04420 811 PANTHER CATION/H + ANTIPORTER 3 807 - -
Tsu04g04420 811 PANTHER CATION/H+ EXCHANGER 3 3 807 - -
Tsu04g04420 811 Pfam Sodium/hydrogen exchanger family 39 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu04g04420 811 Coils Coil 707 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04420 Tsu-Chr4 52002449 52005680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04420 1 800 Antiporter Super Family AT3G17630 69.776 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04420 - - gmx:100780382 1291.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04420 04 52002449 52005680 Tsu04g04420 04 52002449 52005680 ECH