Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04419 ATGGGAGCACAATATTTATCTAAGGTGAAAAATGTGATAACCCTATTTCTTGTAATTGGGTTATGCTTATGCACCCTTGTTGAATGCAAAAAACATGTAAGCATAAAAAACAGACTAGGATCTGGGAAAAATTTGAGCATACATTGCAAATCCGGAGATGATGATCTTGGAGCACAAAACATAGCAGATGGACAAGAATATGGGTTTAGCTTCAATGTTAATTTGTTTAGAACAACATTATTTTTCTGTAATTTAGCATGGGAAAAAGTTCCACAGTATTATATTGATGCGTATTCATATGCCAGGGACCATGTACGATGTGACAGTGGATGTTCATGGATTGTAGCTGCTGAAGGTATTTATGGTTTAAATGGAAAAACAGGTTTTTGGGAATTCATGTACCATTGGCCAAATTGA 417 0.3525 MGAQYLSKVKNVITLFLVIGLCLCTLVECKKHVSIKNRLGSGKNLSIHCKSGDDDLGAQNIADGQEYGFSFNVNLFRTTLFFCNLAWEKVPQYYIDAYSYARDHVRCDSGCSWIVAAEGIYGLNGKTGFWEFMYHWPN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04419 138 PANTHER - 21 121 IPR010264 -
Tsu04g04419 138 PANTHER PUMILIO HOMOLOG 15-LIKE 21 121 - -
Tsu04g04419 138 Pfam Plant self-incompatibility protein S1 32 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04419 Tsu-Chr4 51996588 51997004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04419 30 136 Carbohydrate Esterase AT3G16970 33.636 2.09e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04419 - - mtr:MTR_4g123577 235.728