Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04400 ATGGGGGATGAGGTAGTGTTGTTGGGTTATCATCTCAGTATGTTTGAGATAAGAGTTAGGATTGCATTGGCAGAGAAAGGTGTCAAGTATGAGTACAAGGAAGAGGATCTTGTCAACACCAAGAGTGCACTGCTTCTACAAATGAATCCAGTTCACAAGAAAATCCCAGTCCTCATTCATAATGGGAAGCCCGTTTGTGAATCCCTCATTATTGTTGAGTACATTGATGAGGTCTGGAAGGATCAAACTCCATTGTTGCCCACTGATCCATATCAGAGAGCTCAAGCCAGATTCTGGGCTGATTTTTTTGATAACAAGGTGCATGAAGTTGCAAAGAAGATATGGACTGGAAAAGTGGGTGAACACGAGAAAGAAAAGACAGAGTTAGTAGAGAATTTGAAGACATTGGAGGAGGTTCTTGGGGACAAGCCATATTTTGGAGGTGACACATTTGGGTTTCTTGACATTGCTTTCATTCCTTTTTATAAGTGGTTTTCTACTTATGAGGCAGTAGGCAAAATGAAGTTAGACTGCCCAAAACTCATTGCATGGGGAAAGAGATGTTTGGAGAGAGAAAGTGTGTCCAAATTCGTCTCTGATGAAAAGGATGTCTATGAGTTTGTTATGATGCACAGGAAGAAAATTGGGGTGGACTAA 657 0.411 MGDEVVLLGYHLSMFEIRVRIALAEKGVKYEYKEEDLVNTKSALLLQMNPVHKKIPVLIHNGKPVCESLIIVEYIDEVWKDQTPLLPTDPYQRAQARFWADFFDNKVHEVAKKIWTGKVGEHEKEKTELVENLKTLEEVLGDKPYFGGDTFGFLDIAFIPFYKWFSTYEAVGKMKLDCPKLIAWGKRCLERESVSKFVSDEKDVYEFVMMHRKKIGVD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04400 218 Gene3D Glutaredoxin 1 88 - -
Tsu04g04400 218 Pfam Glutathione S-transferase, C-terminal domain 126 184 - -
Tsu04g04400 218 SFLD Glutathione Transferase (cytosolic) 3 215 IPR040079 -
Tsu04g04400 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 207 IPR010987 -
Tsu04g04400 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Tsu04g04400 218 Coils Coil 119 139 - -
Tsu04g04400 218 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 3 212 - -
Tsu04g04400 218 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Tsu04g04400 218 Pfam Glutathione S-transferase, N-terminal domain 9 77 IPR004045 -
Tsu04g04400 218 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Tsu04g04400 218 SFLD Main.3: Omega- and Tau-like 3 215 IPR045073 -
Tsu04g04400 218 CDD GST_C_Tau 90 209 IPR045074 GO:0004364|GO:0006749
Tsu04g04400 218 CDD GST_N_Tau 5 79 - -
Tsu04g04400 218 Gene3D - 89 218 - -
Tsu04g04400 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 212 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04400 Tsu-Chr4 51875625 51876623 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04400 1 218 Glutathione S-transferase Gene Family AT1G17180 62.273 1.04e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04400 K00799 - gmx:100781460 374.785