Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04383 ATGGCGTCTGATCTGAGCTCGAGGTTGTCAAAGAAAACATCTGTTTTTGGGTTGGAAGCATGGGAATTAATGGGGTTAATAGTTGGTTTATTCATTGTAATCATTCTTCTAGTGTTATCAATATGTCTTACTTCAAAAAAGAAATCCAGAAGAGTCAATGGCATGCTTCCACTGAGCCACAGGTTATCTGTTTCAGAAGAGATCAAAGAGATTAGCGTTGATCAGGTTTCAACAAATAGTCGTCCTCAGAATGGCGCATTTACGAGTCTTTACGACAAATTTAGTGACAAAGAATCCGAAAATATTTTGCTCCAAACAAAGAATGGTGAATATAACAGCCAATCAGGCTCGTTTATTAACGTCGAGAAAGACGCTGGTGGCTCTCAATCAGGTGAAGAAAATGGTGCTAAGTCTCTTTCTGCACACAGGCTTTCTTTGACTTCACCATCGCCTCTGTCTGGTCTTCCTGAGTTCTCTCACCTTGGCTGGGGGCACTGGTTTACATTGAGGGACCTAGAACTTGCAACAAACAAGTTTTCAAAAGCGAATATTATTGGTGAAGGAGGATATGGAGTTGTTTATCAAGGCCAGCTGATCAATGGGAATCCAGTGGCTATTAAGAAGCTACTAAATAATCTTGGACAAGCTGAAAAAGAATTTAGAGTGGAAGTTGAGGCTATTGGTCATGTGAGGCACAAGAATTTGGTTAGACTTTTGGGTTTTTGCATTGAAGGCACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGAAATTTAGAGCAGTGGCTTCATGGAGCCATGCAGCAGCAATATGGTTTTCTCACGTGGGATGCTCGGATTAAAATTCTTCTTGGAACAGCTAAAGCGCTGGCTTACTTGCACGAAGCAATTGAGCCAAAAGTTGTCCATCGAGATATTAAGTCAAGTAATATTCTAATTGATGATGACTTCAATGCCAAAATATCCGACTTTGGACTAGCCAAGTTACTTGGTGCGGGGAAAAGTCACATTACGACTCGAGTAATGGGTACTTTTGGATATGTTGCTCCAGAATATGCCAATTCTGGCTTACTAAACGAGAAGAGTGATGTTTATAGCTATGGCGTATTGCTCCTTGAAGCAATTACTGGAAGAGACCCAGTGGATTATAACCGCTCAGCCGCTGAGGTAAATTTGGTCGATTGGTTGAAGATGATGGTAGGTAATAAGCACGCAGAAGAGGTGGTAGACCCAAACATTGAAACCAGACCATCAACAAGTGCGCTTAAACGAGTCCTTTTGACTGCTTTGCGGTGTGTTGATCCAGATTCTGAAAAAAGACCCAAAATGAGTCAAGTGGTCCGCATGCTTGAATCAGAAGAATATCCCATACCTAGAGAGGATCGAAGACGCAGGAAGAGTAATGCCACAAATACTGATGTGGAGACGCAGAAGGAGATTTCTGATACAGAGAAGAGTGATCATCCAGATTCCAAGTCCAGCAGAAAAAATGTAAGAAGAAATCAGCGAAAGTAA 1518 0.4144 MASDLSSRLSKKTSVFGLEAWELMGLIVGLFIVIILLVLSICLTSKKKSRRVNGMLPLSHRLSVSEEIKEISVDQVSTNSRPQNGAFTSLYDKFSDKESENILLQTKNGEYNSQSGSFINVEKDAGGSQSGEENGAKSLSAHRLSLTSPSPLSGLPEFSHLGWGHWFTLRDLELATNKFSKANIIGEGGYGVVYQGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLVYEYVNNGNLEQWLHGAMQQQYGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSYGVLLLEAITGRDPVDYNRSAAEVNLVDWLKMMVGNKHAEEVVDPNIETRPSTSALKRVLLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSNATNTDVETQKEISDTEKSDHPDSKSSRKNVRRNQRK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04383 505 PANTHER OS01G0323000 PROTEIN 2 505 - -
Tsu04g04383 505 PANTHER RECEPTOR-LIKE KINASE PLANT 2 505 - -
Tsu04g04383 505 ProSitePatterns Protein kinases ATP-binding region signature. 185 208 IPR017441 GO:0005524
Tsu04g04383 505 SUPERFAMILY Protein kinase-like (PK-like) 163 461 IPR011009 -
Tsu04g04383 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Tsu04g04383 505 Gene3D Transferase(Phosphotransferase) domain 1 255 469 - -
Tsu04g04383 505 CDD STKc_IRAK 185 452 - -
Tsu04g04383 505 Pfam Protein kinase domain 180 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04383 505 SMART serkin_6 179 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04383 505 MobiDBLite consensus disorder prediction 439 505 - -
Tsu04g04383 505 Gene3D Phosphorylase Kinase; domain 1 160 254 - -
Tsu04g04383 505 ProSiteProfiles Protein kinase domain profile. 179 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04383 505 MobiDBLite consensus disorder prediction 439 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04383 Tsu-Chr4 51721647 51726389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04383 17 454 Trihelix Transcription Factor Family AT1G70460 40.090 6.12e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu04g04383 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04383 - - gmx:100793499 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04383 04 51721647 51726389 Tsu04g04383 04 51721647 51726389 ECH
Tsu04g04383 04 51721647 51726389 Tsu08g02498 08 37198855 37203422 PCT