Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04382 ATGGGTTGCTTTGGTTTCTGCAAAGAGAATGATTCTTACACAACTGCTGATAAAGGAATCTTCATGCAAAACAATCCTGCAGGGAACTCAAGTTATCATGGAAGACACACACCAATAACCGTTCCTCGACCTATAAATCTTCAACCTATTTCTGTCCCTTCGGTTACAGTAGATGAATTGAGGTCTTTGACAGATAATTTTGGTACAAAGACTTTCATCGGTGAGGGTGCATATGGAAAAGTATATCGCGCTATATTGAAAAATGGACGTGAAGTGGCAATCAAAAAGTTGGATTCCACTAAACAGCCAGACCAAGAATTTCTTTCTCAGGTCTCCATCGTATCAAGGCTAAAGCATGAAAATGTTGTCGAACTTGTTACTTATTGTGTTGATGGTCCATTGCGTGCCCTTGCGTATGAGTATGCTCCTAATGGATCCCTTCATGATATTCTACATGGACGCAAAGGTGTGAAGGGTGCAGAACCTGGTCAAGTTCTGACATGGGCTCAAAGAGTTAAAATTGCTGTTGGAGCAGCTAGAGGACTTGAATATCTTCATGAAAAGGCAGAGGTTCATATTGTCCATCGTTACATTAAATCTAGTAACATTCTTCTATTCGAGGACGATGTTGCAAAGATTGCTGATTTTGATCTGTCGAATCAAGCCCCTGATGCAGCAGCACGTCTTCATTCTACCCGTGTTCTTGGAACTTTTGGTTATCATGCTCCAGAATATGCGATGACTGGAAACCTCAGTTCAAAGAGCGATGTTTACAGTTTTGGAGTCATACTGTTGGAACTCTTAACTGGGCGTAAACCTGTTGATCATACACTTCCCCGAGGACAGCAAAGCCTCGTGACCTGGGCTACACCAAAGCTTAGTGAAGATAAGGTGAAGCAGTGTGTTGATGTTAGACTAAAGGGAGAGTACCCTTCCAAGTCAGTTGCAAAGATGGCTGCTGTTGCTGCACTGTGTGTTCAATATGAAGCCGAGTTTCGACCAAATATGAGCATCATTGTCAAAGCTTTACAGCCTCTGATGAATAATACTCGTCCTGCTCAACCAAGGGAACCACGCAACTTGTAA 1086 0.4245 MGCFGFCKENDSYTTADKGIFMQNNPAGNSSYHGRHTPITVPRPINLQPISVPSVTVDELRSLTDNFGTKTFIGEGAYGKVYRAILKNGREVAIKKLDSTKQPDQEFLSQVSIVSRLKHENVVELVTYCVDGPLRALAYEYAPNGSLHDILHGRKGVKGAEPGQVLTWAQRVKIAVGAARGLEYLHEKAEVHIVHRYIKSSNILLFEDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGNLSSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKMAAVAALCVQYEAEFRPNMSIIVKALQPLMNNTRPAQPREPRNL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04382 361 Gene3D Transferase(Phosphotransferase) domain 1 142 357 - -
Tsu04g04382 361 CDD STKc_IRAK 73 346 - -
Tsu04g04382 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 352 - -
Tsu04g04382 361 Gene3D Phosphorylase Kinase; domain 1 39 141 - -
Tsu04g04382 361 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g04382 361 PIRSF ILK 11 355 - -
Tsu04g04382 361 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Tsu04g04382 361 SUPERFAMILY Protein kinase-like (PK-like) 46 343 IPR011009 -
Tsu04g04382 361 Pfam Protein tyrosine and serine/threonine kinase 71 343 IPR001245 GO:0004672|GO:0006468
Tsu04g04382 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04382 Tsu-Chr4 51718037 51721160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04382 48 355 Receptor kinase-like Gene Family AT4G02010 47.516 1.27e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Tsu04g04382 PK_Tyr_Ser-Thr 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04382 K13436 - gmx:547595 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04382 04 51718037 51721160 Tsu04g04382 04 51718037 51721160 ECH