Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04332 ATGACATCACCATCTATAGTAACAAACACAGAAAGATCGCGTGAttcaaagagaaagaaaagaaaaaacagagcaCAGAAGAATCTTCAAGATCAGATTCAAACCACAAACCACAAATGGAAATCTCAAGCACAACAACAAAACTACTCCAACAAACTCCGTCAAGCCTTAACAAGAGTCAACAACACATCAACCACACAACCCCGTGGAAAAGCTGTCCGAGAAGCCGCTGATAAAGCACTAGCCATGACAGCTAAAGGAAGAACTCGATGGAGCAGAGCCATTTTAACAACCCGGCTCAAACTCAAATTTAGGAAGAAGAAACAGAAACAGAGATTAACGGCATCACCGTTAAATCGATCAAAAAAGTCAAGAATCAACGTTTTACGGTTGAAGGGGAAGGTTGTTCCAAGTGTGCAGAGGAAAGTAAAGTTTCTTGGAGGATTGGTTCCTGGTTGTAAAAAAGAACCATTACCGGTGATtcttgaagaagctattgattATATACCTGCTCTTGAGATGCAGGTTCGAGCTATGAGTGCTCTTTTTAATCTTCTTTCTGCTTCTACTTCCGGCGGTGCCAGTGTTGGCTCCGGTTCCGGTTGA 606 0.3944 MTSPSIVTNTERSRDSKRKKRKNRAQKNLQDQIQTTNHKWKSQAQQQNYSNKLRQALTRVNNTSTTQPRGKAVREAADKALAMTAKGRTRWSRAILTTRLKLKFRKKKQKQRLTASPLNRSKKSRINVLRLKGKVVPSVQRKVKFLGGLVPGCKKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSASTSGGASVGSGSG 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04332 201 MobiDBLite consensus disorder prediction 1 48 - -
Tsu04g04332 201 CDD bHLH_AtIBH1_like 128 182 IPR044549 GO:0006355
Tsu04g04332 201 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 11 197 - -
Tsu04g04332 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 189 IPR036638 GO:0046983
Tsu04g04332 201 MobiDBLite consensus disorder prediction 28 48 - -
Tsu04g04332 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 11 197 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04332 Tsu-Chr4 51273940 51275058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04332 37 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 53.757 6.95e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04332 - - gmx:100803765 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04332 04 51273940 51275058 Tsu04g04332 04 51273940 51275058 ECH