Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04315 ATGGCTAACACATACAATATAGAGAGCAAGGTTGTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAAGTGGTAGGGAAGCTTGAAAGGAACTGTGAGATTGGGACTACTAAAAAGGGTTTATCCATTTTCACCAACATGATGAGTGACCCTTTATCTAGGATTAGATTCTACCCTCTTCGTGTTATGTTGGTAGCTGAGCTGGTTGAAAGCAATGAGCTTGTTGGAGTTGTTAGAGGATGCATTAAAAGTGTGCAAACTTCTTCTGGATCACTCTTCAAGATGGGATGTATACTAGGTCTTAGAGTCTCTCCTACTCACAGGAGAAAGGGGGTTGGACTAAAACTTATGACCTCAATTGAAGAATGGATGCTAATAAATGGTGCTGACTATGCATTCTTAGCCACAGAAAAGAACAACAATGCCTCAAAAAACCTATTCACAAACAAATGCAATTATGTCAATCTCACATCACTTACCATATTTCTCCATCCAACAACTTTCCCTACAAACCACATTTCCAACAAGGACATAAAGAttgacaaaataaacatagatcAAGCAATATCCTTGTACACAAGAATCTTTAAGACCAAAGATTTGTATCCATTAGACATGGATGTTATTCTCAAAGAAAAACTTAGCCTAGCTAATGATAATAAAGTTCATGTTAAGACAAAATTATTTCAACCACTTAGGTTTCTTCACGCGACATTAAATCATGCAAAGGACAAAATATGTCCATGTTTGAGAATGTTAGGGAATGAGGAGTCATTGATGTGTGAAAGTTTtgggtttctttttctttatggACTTCATGGAGAAGGAGAGAATCTTGGAGAATTAATGGAATCAATATGGAGTTTTACATCAAAATTAGGAGAGAAATTAAAGGAGTGTAGAGTGGTTATTACTGAATTAGGGTTTGGTGATCCACTTTTAAACCATGTTCCTCAAATGGAATCTATGTCATGTATTGATGATATGTGGTACACAAAAAGACTTGCAAGGGACagtgatgatggtgatgaattgGTGCAGCAGCAGGTTATGAAGAGACAACTCGGGAATGTGTTTGTGGATCCTAGAGATTTTTAG 1098 0.347 MANTYNIESKVVIREFDEDRDVKVVGKLERNCEIGTTKKGLSIFTNMMSDPLSRIRFYPLRVMLVAELVESNELVGVVRGCIKSVQTSSGSLFKMGCILGLRVSPTHRRKGVGLKLMTSIEEWMLINGADYAFLATEKNNNASKNLFTNKCNYVNLTSLTIFLHPTTFPTNHISNKDIKIDKINIDQAISLYTRIFKTKDLYPLDMDVILKEKLSLANDNKVHVKTKLFQPLRFLHATLNHAKDKICPCLRMLGNEESLMCESFGFLFLYGLHGEGENLGELMESIWSFTSKLGEKLKECRVVITELGFGDPLLNHVPQMESMSCIDDMWYTKRLARDSDDGDELVQQQVMKRQLGNVFVDPRDF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04315 365 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 148 IPR016181 -
Tsu04g04315 365 Gene3D - 11 163 - -
Tsu04g04315 365 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 217 - -
Tsu04g04315 365 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 221 365 - -
Tsu04g04315 365 Pfam Acetyltransferase (GNAT) family 66 153 IPR000182 GO:0016407
Tsu04g04315 365 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 6 217 - -
Tsu04g04315 365 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 215 IPR000182 GO:0016407
Tsu04g04315 365 CDD NAT_SF 63 134 - -
Tsu04g04315 365 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 221 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04315 Tsu-Chr4 51152261 51153980 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu04g04315 Acetyltransf_1 7.5e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04315 - - mtr:MTR_4g122030 498.434