Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04270 ATGGTTCATTTCCCATCTTTTGTAAACGGATTAGCAAGAACAATATCAatcaagaaagagaagaattatCAAAAGGATGATGCAAGAAAAGCTGTGGAAGAATTGGCAAAAGAAGCAAGAAAGAATGAATTGTTTTTGAGTTCCTCTGGAGTTGTTAGGTCCAACAAGGATAATagttttgtttctgtttttacaCACAGAGGCCAAAAAGGAGTCAACCAAGATCGTCTTGTTGTTTGGGAGGAATTTGGTTGCCAACAAGACATGATGTTTTGTGGGGTTTTTGATGGGCATGGTCCTTGGGGACATTTTGTAGCCAAAAGGGTAAGGAAATTAGTACCAGCCTTTATGCTTTGCAATTGGCAAGAAAATTTGGCTGCAAAATCAATTGACCTAAATTTTAAGATGGAAGAAGACAAAAATGTTCATAGATTGGAGCTATGGAAAGAGTCCTACATAAAGGCTTTTGCTGCCGTTGACCAAGATTTGAAGCAGCACACTGGATTTGATTCATTTAGAAGTGGCACTACAGCTTTGACATTTATCAAACAGGGTGAAAACCTTATTATAGCAAATGTGGGTGATTCAAGACTTGTGTTGGCAACAACTTCAGAGGATGGCACATTATTTGCACTTCAGCTTACCACTGACTTCAAACCAAATTTACCAGAGGAAGCAGAGCGTATAAAAGAATCAAAAGGACGTGTATTTTGTATGAAAGATGAACCAGGAGTATACAGAATTTGGATGCCAAACTGTAAAACACCAGGATTAGCAATATCTAGAGCTTTTGGTGATTATTGTATGAAAGATTATGGTCTAATCTCTGTGCCAGACGTGACACATAGAAAACTTACCACTAGAGATCAATTTATCATCTTAGCTTCAGATGGGGTGTGGGATGTTGTATCAAACCAAGAGGCAGTGAAGATAGTTTCAACAGCACCACAGAAAGAAAAAGCAAGTGAAAGGCTTGTGAAGTATGCTATGCGTGaatggaaaagaaagagaagtgGTATTGCCATGGATGATATGTCAGTAATTTGCCTCTTCTTTAATCAACTTCCAGCCACTAAAGTATTTGATTAA 1089 0.3627 MVHFPSFVNGLARTISIKKEKNYQKDDARKAVEELAKEARKNELFLSSSGVVRSNKDNSFVSVFTHRGQKGVNQDRLVVWEEFGCQQDMMFCGVFDGHGPWGHFVAKRVRKLVPAFMLCNWQENLAAKSIDLNFKMEEDKNVHRLELWKESYIKAFAAVDQDLKQHTGFDSFRSGTTALTFIKQGENLIIANVGDSRLVLATTSEDGTLFALQLTTDFKPNLPEEAERIKESKGRVFCMKDEPGVYRIWMPNCKTPGLAISRAFGDYCMKDYGLISVPDVTHRKLTTRDQFIILASDGVWDVVSNQEAVKIVSTAPQKEKASERLVKYAMREWKRKRSGIAMDDMSVICLFFNQLPATKVFD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04270 362 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 357 - -
Tsu04g04270 362 SUPERFAMILY PP2C-like 53 355 IPR036457 -
Tsu04g04270 362 CDD PP2Cc 60 352 IPR001932 -
Tsu04g04270 362 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Tsu04g04270 362 PANTHER ALPHABET, ISOFORM E-RELATED 1 357 - -
Tsu04g04270 362 Coils Coil 18 38 - -
Tsu04g04270 362 SMART PP2C_4 51 350 IPR001932 -
Tsu04g04270 362 Pfam Protein phosphatase 2C 85 331 IPR001932 -
Tsu04g04270 362 Gene3D - 46 355 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04270 Tsu-Chr4 50846862 50849107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04270 1 353 PP2C-type Phosphatase Gene Family AT3G05640 58.592 2.24e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04270 - - gmx:100817397 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04270 04 50846862 50849107 Tsu04g04270 04 50846862 50849107 ECH