Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04248 ATGTCAGAACCCTTTGAGCCATCACCCTTTATTCCTGGAGGTACCAGAGAATTCGATGATGACTTCAACTCAGTCAGCTTCAAGCAGGGAGGAGGAGAAGCAATTGCTGATGCATCACAGTTTTTACCTGTgaatgaaaaagagaataatacaagAGAAAATAATGTTGCTAAGATAAAAGTTGTGGTACGCAAAAGACctttaaataaaaaggaacttGCTAAGAAGGAGGATGATGTTGTAACTGTATATGGCAATGCATATTTGACCGTTCATGAACCTAAAGTGAAGGTTGATTTGACAGCTTATGTGGAGAAGcatgagttttgttttgatgcTGTTATTGATGAGAATGTTACCAATGATGAAGTATATCGAGTTACGGTAGAACCTATTATTCCTACAATTTTCGAGAGGACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATTCACAATGCAACCATTACCACTCAGAGCTGCAAATGACCTTGTTAGACAATTGCACCGGCCTGTTTACCGAAATCAGAAATTTAAATTGTGGCTTAGCTACTTTGAGATATACGGGGGAAAACTGTTTGATCTTCTTGGTGACAGGAAGAAACTCTTAATGAGAGAAGATGGACGACAGCAAGTTTGTATTGTTGGACtgcaagaatttgaagtttcTGATGTACAGATTGTCAAAGAATTCATTGAAAAGGGGAATGCAGCAAGAAGTACAGGATCCACTGGCGCGAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAATTGGTTGTAAAGAGGCACAATGAGGTGATAAAAGAGAGCAGGCGAAATAATGATGGAAATGAGGCAAAAAGTGGGAAGGTTGTGGGGAAGATTTCTTTCATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACTACTGACAATGACCGTCAGACAAGGATTGAAGGAGCTGAAATCAACAAGAGTCTTTTGGCTTTGAAGGAGTGCATTCGAGCTTTGGACAACGACCAGATCCATATTCCTTTTCGCGGAAGTAAACTTACAGAAGTGCTTCGTGACTCTTTTGTTGGCAATTCAAAGACAGTCATGATCTCTTGTATATCTCCAAATGCGGGATCCTGTGAACACACACTTAATACCTTGAGATACGCTGATCGAGTTAAAAGTCTGTCCAAAAGTGGCAATCCTAGAAAGGACCAGGCCCCAAATCCAGTACCACAGTCAGATAAAGAGGTTTTATCCACATCATCCCTTCCAGATAGTACTTGTGCCGAGGATTTTTATGATCAACGTCAAGAGGTGAAAACAGTGGATATAGGCAGGAAAGTAATTGAGAAGGAAAAATCGTTGTACAGCTCTGGTGCTGATGTTGACAAGCAACCATCGAGTTTTTCTTCCAGTTTTTTATACAACGGACGAGAGGAGAAAGGTTTGCCTTCTGTCTCAATGGACAGGAACAAGTTTGAAGTGAAGAATTCGAATAGTCAAAAGATGAACCTTTATTCCCAAAATGATACGGATGATAAAGTGCAAAAGGTGTCTCCTCCTCGCAGAAAAGGGGCCAAGGAGGAGAGATCTGAAAGGTCTTTGAATTGGTCAAAAAGGGATCCCAATGGTTATGATCAATTCACCACTAGTTCCAAGCAAAACACAGGGAATTATAACACAGTTGCCACTGGATCCAGGCAGCCTGAAACAGAATCCTCACCTGATGTGAATATCAGCGCCGTTCTTGAGGAGGAAGAAGCATTAATTGCTGCTCATAGGAAAGAAATCGAGGACACAATGGAGATTGTCCGTGAAGAAATGAAACTATTAGCAGAAGTGGACCAGCCAGGAAGTCTTATTGACAACTATGTAACGCAGTTGAGTTTGGTGCTTTCGCGTAAAGCAGCTAGTCTTGCAAGTCTCCAGGCTCGCCTTACAAGATTCCAACATCGACTAAAAGAACAGGAGATTCTAAGCAGAAAAAGAGTACCCCGTTAA 1995 0.403 MSEPFEPSPFIPGGTREFDDDFNSVSFKQGGGEAIADASQFLPVNEKENNTRENNVAKIKVVVRKRPLNKKELAKKEDDVVTVYGNAYLTVHEPKVKVDLTAYVEKHEFCFDAVIDENVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTFTMQPLPLRAANDLVRQLHRPVYRNQKFKLWLSYFEIYGGKLFDLLGDRKKLLMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEVIKESRRNNDGNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNPVPQSDKEVLSTSSLPDSTCAEDFYDQRQEVKTVDIGRKVIEKEKSLYSSGADVDKQPSSFSSSFLYNGREEKGLPSVSMDRNKFEVKNSNSQKMNLYSQNDTDDKVQKVSPPRRKGAKEERSERSLNWSKRDPNGYDQFTTSSKQNTGNYNTVATGSRQPETESSPDVNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSLVLSRKAASLASLQARLTRFQHRLKEQEILSRKRVPR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04248 664 Pfam Kinesin motor domain 64 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g04248 664 SMART kinesin_4 56 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g04248 664 MobiDBLite consensus disorder prediction 453 473 - -
Tsu04g04248 664 CDD KISc_KIF2_like 58 391 - -
Tsu04g04248 664 MobiDBLite consensus disorder prediction 538 574 - -
Tsu04g04248 664 Coils Coil 637 657 - -
Tsu04g04248 664 PRINTS Kinesin heavy chain signature 249 266 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g04248 664 PRINTS Kinesin heavy chain signature 293 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g04248 664 PRINTS Kinesin heavy chain signature 139 160 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g04248 664 PRINTS Kinesin heavy chain signature 343 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g04248 664 MobiDBLite consensus disorder prediction 495 512 - -
Tsu04g04248 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 393 IPR027417 -
Tsu04g04248 664 MobiDBLite consensus disorder prediction 495 574 - -
Tsu04g04248 664 PANTHER KINESIN-LIKE PROTEIN 526 663 - -
Tsu04g04248 664 PANTHER KINESIN-LIKE PROTEIN 1 528 - -
Tsu04g04248 664 MobiDBLite consensus disorder prediction 393 421 - -
Tsu04g04248 664 MobiDBLite consensus disorder prediction 397 421 - -
Tsu04g04248 664 MobiDBLite consensus disorder prediction 458 473 - -
Tsu04g04248 664 MobiDBLite consensus disorder prediction 513 537 - -
Tsu04g04248 664 ProSitePatterns Kinesin motor domain signature. 292 303 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu04g04248 664 Coils Coil 581 612 - -
Tsu04g04248 664 PANTHER KINESIN-RELATED PROTEIN 6 526 663 - -
Tsu04g04248 664 PANTHER KINESIN-RELATED PROTEIN 6 1 528 - -
Tsu04g04248 664 Gene3D Kinesin motor domain 35 396 IPR036961 -
Tsu04g04248 664 ProSiteProfiles Kinesin motor domain profile. 58 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04248 Tsu-Chr4 50669123 50676116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04248 50 393 Calmodulin-binding Proteins AT5G65930 34.181 5.16e-43 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04248 K10393 - gmx:100798612 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04248 04 50669123 50676116 Tsu04g04248 04 50669123 50676116 ECH