Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g04199 | ATGGGTTGTTTTCCTTGTTTTGTATCTTTCAACAAAGAAGATTCCCATGTTCACCCTAGAAGGGTTACCTCAGaAAGATTTCAATTACTGGGTGCCTCAAGTCCTAACACGAAAGATGAGTCGGAAGGAAGTGTGCGTACACATACATTTACATTACAAGAGCTTACAACAGCTACCAATAATTTTTCGCCGGAATATTTAATAGGTGAAGGGGGTTTTGGCCCTGTATACAAAGGTCACCTTGAGAATCATAAAAACGTAGTTGCTGTGAAACAGCTTAAGCAAAAAAGTTGTCAAGGTGATCGAGAATTTTTGGCGGAGGTTCTCATGCTCAACCTATTAAATCACAAAAATCTTGTGAAATTGCTTGGTTATTGTGCTGATGGAGATCAACGGCTACTTGTTTACGAGTATATGGCATTGGGGTCTTTAGACATGCATTTACATGATCTTCCTCCTCGCGCAAAGCCACTAGATTGGAATACAAGGATGAAAATAGCATTGGTAACAGCAAAGGGATTGAAGTATATGCATGAGGCAACTCCCCCTGTAATTTATAGAGACTTAAAATCATCCAACATTCTCCTAGATGAAAATTATCAAGCCAAGTTATCAGATTTTGGGTTGGCGAAACTTGGACCAATTGGTGATATGAGTCATGTAACTACTAGAGTAATGGGAACATATGGTTATTGTGCCCCTGAATATTTTATGACTGGACAACTAACTATGAAGTCTGATGTCTATAGTTACGGAGTACTCCTACTCGAACTTATCTCAGGACGTAGAGCTATCGATGAAAAACGTCCACAACCAGAGCGAAGTTTAGTTGTTTGGGCAAAAGCTCATTTTAATAACCGTAGGAACTTTATCAAATTGGTTGACCCTCAACTTCAAGGTCGTTTTCCAATGGAAGGACTTTATCAAGCAGTTGCAATTGCAGCAATGTGTGTGCATACACAAGCTTCAGCAAGACCTCTAATTAGTGATATTGTGGATAGTCTTACATACATGACCAGAAGAGACACATCACCCcaattgagaaaaagtttgatgaCTAAGTGA | 1065 | 0.3869 | MGCFPCFVSFNKEDSHVHPRRVTSERFQLLGASSPNTKDESEGSVRTHTFTLQELTTATNNFSPEYLIGEGGFGPVYKGHLENHKNVVAVKQLKQKSCQGDREFLAEVLMLNLLNHKNLVKLLGYCADGDQRLLVYEYMALGSLDMHLHDLPPRAKPLDWNTRMKIALVTAKGLKYMHEATPPVIYRDLKSSNILLDENYQAKLSDFGLAKLGPIGDMSHVTTRVMGTYGYCAPEYFMTGQLTMKSDVYSYGVLLLELISGRRAIDEKRPQPERSLVVWAKAHFNNRRNFIKLVDPQLQGRFPMEGLYQAVAIAAMCVHTQASARPLISDIVDSLTYMTRRDTSPQLRKSLMTK | 354 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g04199 | 354 | SMART | serkin_6 | 62 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu04g04199 | 354 | Pfam | Protein kinase domain | 66 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu04g04199 | 354 | CDD | STKc_IRAK | 68 | 336 | - | - | |
Tsu04g04199 | 354 | ProSiteProfiles | Protein kinase domain profile. | 62 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu04g04199 | 354 | PANTHER | OS07G0668900 PROTEIN | 33 | 349 | - | - | |
Tsu04g04199 | 354 | PANTHER | OS07G0668900 PROTEIN | 33 | 349 | - | - | |
Tsu04g04199 | 354 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 184 | 196 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu04g04199 | 354 | Gene3D | Phosphorylase Kinase; domain 1 | 33 | 138 | - | - | |
Tsu04g04199 | 354 | SUPERFAMILY | Protein kinase-like (PK-like) | 45 | 334 | IPR011009 | - | |
Tsu04g04199 | 354 | PIRSF | ILK | 13 | 350 | - | - | |
Tsu04g04199 | 354 | Gene3D | Transferase(Phosphotransferase) domain 1 | 139 | 351 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g04199 | Tsu-Chr4 | 50294013 | 50295951 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g04199 | 1 | 338 | Glycoside Hydrolase | AT3G07070 | 55.337 | 1.10e-136 | 393 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Tsu04g04199 | Pkinase | 1.8e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g04199 | - | K13430 | csv:101219880 | 432.95 |